Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDK5Q00535 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDK5Q00535 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.41■□□□□ 0.22
CDK5Q00535 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDK5Q00535 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDK5Q00535 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDK5Q00535 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.41■□□□□ 0.22
CDK5Q00535 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDK5Q00535 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDK5Q00535 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.41■□□□□ 0.22
CDK5Q00535 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CDK5Q00535 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDK5Q00535 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
CDK5Q00535 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDK5Q00535 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDK5Q00535 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.41■□□□□ 0.22
CDK5Q00535 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CDK5Q00535 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDK5Q00535 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDK5Q00535 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDK5Q00535 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDK5Q00535 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDK5Q00535 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDK5Q00535 KRT18P23-201ENST00000435622 1283 ntBASIC16.41■□□□□ 0.22
CDK5Q00535 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.41■□□□□ 0.22
CDK5Q00535 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.41■□□□□ 0.22
CDK5Q00535 AC097488.1-201ENST00000507834 756 ntBASIC16.41■□□□□ 0.22
CDK5Q00535 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.41■□□□□ 0.22
CDK5Q00535 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.41■□□□□ 0.22
CDK5Q00535 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.41■□□□□ 0.22
CDK5Q00535 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.41■□□□□ 0.22
CDK5Q00535 CD177P1-201ENST00000606252 935 ntBASIC16.41■□□□□ 0.22
CDK5Q00535 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDK5Q00535 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.41■□□□□ 0.22
CDK5Q00535 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDK5Q00535 AL024508.2-201ENST00000607749 1894 ntBASIC16.41■□□□□ 0.22
CDK5Q00535 AL355312.1-201ENST00000407115 2176 ntBASIC16.41■□□□□ 0.22
CDK5Q00535 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDK5Q00535 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.41■□□□□ 0.22
CDK5Q00535 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDK5Q00535 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDK5Q00535 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.41■□□□□ 0.22
CDK5Q00535 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CDK5Q00535 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDK5Q00535 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDK5Q00535 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDK5Q00535 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.4■□□□□ 0.22
CDK5Q00535 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDK5Q00535 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.4■□□□□ 0.22
CDK5Q00535 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.4■□□□□ 0.22
CDK5Q00535 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CDK5Q00535 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDK5Q00535 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDK5Q00535 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDK5Q00535 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDK5Q00535 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.4■□□□□ 0.22
CDK5Q00535 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDK5Q00535 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDK5Q00535 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDK5Q00535 HCG11-201ENST00000411553 5696 ntBASIC16.4■□□□□ 0.22
CDK5Q00535 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.4■□□□□ 0.22
CDK5Q00535 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDK5Q00535 DUTP2-201ENST00000519164 463 ntBASIC16.4■□□□□ 0.22
CDK5Q00535 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDK5Q00535 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.4■□□□□ 0.22
CDK5Q00535 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CDK5Q00535 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDK5Q00535 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
CDK5Q00535 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDK5Q00535 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDK5Q00535 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CDK5Q00535 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.4■□□□□ 0.22
CDK5Q00535 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDK5Q00535 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDK5Q00535 AP001094.4-201ENST00000579008 2176 ntBASIC16.4■□□□□ 0.22
CDK5Q00535 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDK5Q00535 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDK5Q00535 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.4■□□□□ 0.22
CDK5Q00535 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
CDK5Q00535 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
CDK5Q00535 LINC00602-201ENST00000629776 2065 ntBASIC16.39■□□□□ 0.21
CDK5Q00535 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDK5Q00535 AD000864.1-201ENST00000624076 2295 ntBASIC16.39■□□□□ 0.21
CDK5Q00535 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDK5Q00535 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CDK5Q00535 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
CDK5Q00535 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDK5Q00535 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDK5Q00535 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CDK5Q00535 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDK5Q00535 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDK5Q00535 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDK5Q00535 NUDT16P1-203ENST00000513809 620 ntBASIC16.39■□□□□ 0.21
CDK5Q00535 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.39■□□□□ 0.21
CDK5Q00535 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.39■□□□□ 0.21
CDK5Q00535 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.39■□□□□ 0.21
CDK5Q00535 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDK5Q00535 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
CDK5Q00535 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.39■□□□□ 0.21
CDK5Q00535 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms