Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCNA1P78396 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.64■□□□□ 0.89
CCNA1P78396 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.64■□□□□ 0.89
CCNA1P78396 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.64■□□□□ 0.89
CCNA1P78396 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.64■□□□□ 0.89
CCNA1P78396 AC092910.1-201ENST00000482027 1129 ntBASIC20.64■□□□□ 0.89
CCNA1P78396 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.64■□□□□ 0.89
CCNA1P78396 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CCNA1P78396 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCNA1P78396 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCNA1P78396 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCNA1P78396 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCNA1P78396 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.64■□□□□ 0.89
CCNA1P78396 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCNA1P78396 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.63■□□□□ 0.89
CCNA1P78396 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCNA1P78396 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCNA1P78396 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCNA1P78396 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CCNA1P78396 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCNA1P78396 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.63■□□□□ 0.89
CCNA1P78396 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCNA1P78396 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCNA1P78396 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.63■□□□□ 0.89
CCNA1P78396 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.63■□□□□ 0.89
CCNA1P78396 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CCNA1P78396 MED15P5-201ENST00000423150 992 ntBASIC20.63■□□□□ 0.89
CCNA1P78396 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.63■□□□□ 0.89
CCNA1P78396 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.63■□□□□ 0.89
CCNA1P78396 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC20.63■□□□□ 0.89
CCNA1P78396 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.63■□□□□ 0.89
CCNA1P78396 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCNA1P78396 AC008735.5-201ENST00000623544 497 ntBASIC20.63■□□□□ 0.89
CCNA1P78396 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.63■□□□□ 0.89
CCNA1P78396 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.63■□□□□ 0.89
CCNA1P78396 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
CCNA1P78396 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CCNA1P78396 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CCNA1P78396 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CCNA1P78396 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCNA1P78396 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.62■□□□□ 0.89
CCNA1P78396 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.62■□□□□ 0.89
CCNA1P78396 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.62■□□□□ 0.89
CCNA1P78396 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CCNA1P78396 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCNA1P78396 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCNA1P78396 AC098831.1-202ENST00000438821 336 ntBASIC20.62■□□□□ 0.89
CCNA1P78396 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.62■□□□□ 0.89
CCNA1P78396 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CCNA1P78396 AC092183.1-201ENST00000469884 875 ntBASIC20.62■□□□□ 0.89
CCNA1P78396 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCNA1P78396 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.62■□□□□ 0.89
CCNA1P78396 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.62■□□□□ 0.89
CCNA1P78396 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.62■□□□□ 0.89
CCNA1P78396 AC025062.2-201ENST00000605477 670 ntBASIC20.62■□□□□ 0.89
CCNA1P78396 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.62■□□□□ 0.89
CCNA1P78396 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCNA1P78396 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCNA1P78396 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCNA1P78396 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCNA1P78396 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCNA1P78396 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCNA1P78396 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCNA1P78396 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCNA1P78396 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCNA1P78396 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.61■□□□□ 0.89
CCNA1P78396 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCNA1P78396 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CCNA1P78396 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CCNA1P78396 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
CCNA1P78396 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCNA1P78396 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCNA1P78396 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CCNA1P78396 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCNA1P78396 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
CCNA1P78396 PGAM5P1-201ENST00000518923 814 ntBASIC20.61■□□□□ 0.89
CCNA1P78396 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.61■□□□□ 0.89
CCNA1P78396 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.61■□□□□ 0.89
CCNA1P78396 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.61■□□□□ 0.89
CCNA1P78396 AC140113.2-201ENST00000604370 208 ntBASIC20.61■□□□□ 0.89
CCNA1P78396 Z83851.2-201ENST00000609564 659 ntBASIC20.61■□□□□ 0.89
CCNA1P78396 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCNA1P78396 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.61■□□□□ 0.89
CCNA1P78396 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCNA1P78396 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCNA1P78396 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCNA1P78396 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CCNA1P78396 AFG3L1P-217ENST00000557444 2447 ntBASIC20.61■□□□□ 0.89
CCNA1P78396 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCNA1P78396 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCNA1P78396 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCNA1P78396 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCNA1P78396 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCNA1P78396 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.6■□□□□ 0.89
CCNA1P78396 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCNA1P78396 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCNA1P78396 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCNA1P78396 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCNA1P78396 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.6■□□□□ 0.89
CCNA1P78396 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms