Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
EPHB4P54760 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EPHB4P54760 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EPHB4P54760 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.42■□□□□ 0.86
EPHB4P54760 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
EPHB4P54760 FAM220CP-201ENST00000395253 831 ntBASIC20.42■□□□□ 0.86
EPHB4P54760 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.42■□□□□ 0.86
EPHB4P54760 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.42■□□□□ 0.86
EPHB4P54760 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.42■□□□□ 0.86
EPHB4P54760 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.42■□□□□ 0.86
EPHB4P54760 AC106730.1-201ENST00000566722 1090 ntBASIC20.42■□□□□ 0.86
EPHB4P54760 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.42■□□□□ 0.86
EPHB4P54760 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.42■□□□□ 0.86
EPHB4P54760 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
EPHB4P54760 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
EPHB4P54760 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EPHB4P54760 AC104581.1-202ENST00000635932 2618 ntBASIC20.42■□□□□ 0.86
EPHB4P54760 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
EPHB4P54760 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
EPHB4P54760 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
EPHB4P54760 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
EPHB4P54760 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.42■□□□□ 0.86
EPHB4P54760 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EPHB4P54760 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
EPHB4P54760 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
EPHB4P54760 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EPHB4P54760 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.42■□□□□ 0.86
EPHB4P54760 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EPHB4P54760 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
EPHB4P54760 SDHAP1-207ENST00000440850 2000 ntBASIC20.41■□□□□ 0.86
EPHB4P54760 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.41■□□□□ 0.86
EPHB4P54760 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EPHB4P54760 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EPHB4P54760 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
EPHB4P54760 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.41■□□□□ 0.86
EPHB4P54760 AL390961.4-201ENST00000623958 2535 ntBASIC20.41■□□□□ 0.86
EPHB4P54760 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.41■□□□□ 0.86
EPHB4P54760 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
EPHB4P54760 AL592071.1-201ENST00000611956 408 ntBASIC20.41■□□□□ 0.86
EPHB4P54760 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
EPHB4P54760 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EPHB4P54760 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
EPHB4P54760 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
EPHB4P54760 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
EPHB4P54760 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EPHB4P54760 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.41■□□□□ 0.86
EPHB4P54760 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.41■□□□□ 0.86
EPHB4P54760 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
EPHB4P54760 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EPHB4P54760 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
EPHB4P54760 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
EPHB4P54760 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
EPHB4P54760 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
EPHB4P54760 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
EPHB4P54760 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
EPHB4P54760 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
EPHB4P54760 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
EPHB4P54760 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.4■□□□□ 0.86
EPHB4P54760 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
EPHB4P54760 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
EPHB4P54760 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
EPHB4P54760 MIR940-201ENST00000401276 94 ntBASIC20.4■□□□□ 0.86
EPHB4P54760 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
EPHB4P54760 RN7SL606P-201ENST00000472779 293 ntBASIC20.4■□□□□ 0.86
EPHB4P54760 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.4■□□□□ 0.86
EPHB4P54760 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.4■□□□□ 0.86
EPHB4P54760 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.4■□□□□ 0.86
EPHB4P54760 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.4■□□□□ 0.86
EPHB4P54760 AC009065.1-201ENST00000564055 1225 ntBASIC20.4■□□□□ 0.86
EPHB4P54760 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.4■□□□□ 0.86
EPHB4P54760 AC010240.3-201ENST00000607688 395 ntBASIC20.4■□□□□ 0.86
EPHB4P54760 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.4■□□□□ 0.86
EPHB4P54760 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
EPHB4P54760 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
EPHB4P54760 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
EPHB4P54760 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
EPHB4P54760 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.39■□□□□ 0.86
EPHB4P54760 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.39■□□□□ 0.86
EPHB4P54760 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
EPHB4P54760 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.86
EPHB4P54760 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
EPHB4P54760 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.39■□□□□ 0.85
EPHB4P54760 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
EPHB4P54760 PMS2P7-201ENST00000506558 1336 ntBASIC20.39■□□□□ 0.85
EPHB4P54760 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
EPHB4P54760 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
EPHB4P54760 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.39■□□□□ 0.85
EPHB4P54760 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
EPHB4P54760 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
EPHB4P54760 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.39■□□□□ 0.85
EPHB4P54760 HMGN1P19-201ENST00000436976 333 ntBASIC20.39■□□□□ 0.85
EPHB4P54760 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
EPHB4P54760 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.39■□□□□ 0.85
EPHB4P54760 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.39■□□□□ 0.85
EPHB4P54760 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.39■□□□□ 0.85
EPHB4P54760 AC124864.1-201ENST00000623408 392 ntBASIC20.39■□□□□ 0.85
EPHB4P54760 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
EPHB4P54760 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.39■□□□□ 0.85
EPHB4P54760 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
EPHB4P54760 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms