Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 Z83851.2-201ENST00000609564 659 ntBASIC25.9■■□□□ 1.74
CLTCL1P53675 AC107918.4-202ENST00000641623 219 ntBASIC25.9■■□□□ 1.74
CLTCL1P53675 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CLTCL1P53675 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CLTCL1P53675 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CLTCL1P53675 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
CLTCL1P53675 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CLTCL1P53675 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
CLTCL1P53675 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.74
CLTCL1P53675 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
CLTCL1P53675 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CLTCL1P53675 BX842568.4-201ENST00000421222 227 ntBASIC25.89■■□□□ 1.74
CLTCL1P53675 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC25.89■■□□□ 1.74
CLTCL1P53675 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CLTCL1P53675 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC25.89■■□□□ 1.74
CLTCL1P53675 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
CLTCL1P53675 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC25.89■■□□□ 1.74
CLTCL1P53675 NKAPP1-205ENST00000585790 367 ntBASIC25.89■■□□□ 1.74
CLTCL1P53675 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CLTCL1P53675 AC073592.4-201ENST00000623827 446 ntBASIC25.89■■□□□ 1.74
CLTCL1P53675 AP000867.4-201ENST00000641616 219 ntBASIC25.89■■□□□ 1.74
CLTCL1P53675 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC25.89■■□□□ 1.74
CLTCL1P53675 AC104109.2-201ENST00000602919 1418 ntBASIC25.89■■□□□ 1.74
CLTCL1P53675 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CLTCL1P53675 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC25.89■■□□□ 1.73
CLTCL1P53675 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
CLTCL1P53675 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC25.89■■□□□ 1.73
CLTCL1P53675 PHGDH-209ENST00000641074 1780 ntBASIC25.89■■□□□ 1.73
CLTCL1P53675 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
CLTCL1P53675 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
CLTCL1P53675 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CLTCL1P53675 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CLTCL1P53675 KRT18P27-201ENST00000427733 1299 ntBASIC25.88■■□□□ 1.73
CLTCL1P53675 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CLTCL1P53675 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC25.88■■□□□ 1.73
CLTCL1P53675 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC25.88■■□□□ 1.73
CLTCL1P53675 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC25.88■■□□□ 1.73
CLTCL1P53675 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC25.88■■□□□ 1.73
CLTCL1P53675 COX5A-204ENST00000567270 579 ntTSL 3 BASIC25.88■■□□□ 1.73
CLTCL1P53675 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CLTCL1P53675 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
CLTCL1P53675 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CLTCL1P53675 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CLTCL1P53675 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CLTCL1P53675 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CLTCL1P53675 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CLTCL1P53675 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CLTCL1P53675 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
CLTCL1P53675 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC25.88■■□□□ 1.73
CLTCL1P53675 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CLTCL1P53675 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC25.88■■□□□ 1.73
CLTCL1P53675 FAM220CP-201ENST00000395253 831 ntBASIC25.88■■□□□ 1.73
CLTCL1P53675 COX10-202ENST00000429152 875 ntTSL 2 BASIC25.88■■□□□ 1.73
CLTCL1P53675 PMPCAP1-201ENST00000508114 1576 ntBASIC25.88■■□□□ 1.73
CLTCL1P53675 AC092865.5-201ENST00000545435 363 ntBASIC25.88■■□□□ 1.73
CLTCL1P53675 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC25.88■■□□□ 1.73
CLTCL1P53675 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC25.88■■□□□ 1.73
CLTCL1P53675 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CLTCL1P53675 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CLTCL1P53675 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CLTCL1P53675 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC25.87■■□□□ 1.73
CLTCL1P53675 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CLTCL1P53675 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
CLTCL1P53675 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CLTCL1P53675 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC25.87■■□□□ 1.73
CLTCL1P53675 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC25.87■■□□□ 1.73
CLTCL1P53675 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC25.87■■□□□ 1.73
CLTCL1P53675 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC25.87■■□□□ 1.73
CLTCL1P53675 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC25.87■■□□□ 1.73
CLTCL1P53675 NMU-202ENST00000505262 693 ntTSL 3 BASIC25.87■■□□□ 1.73
CLTCL1P53675 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC25.87■■□□□ 1.73
CLTCL1P53675 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC25.87■■□□□ 1.73
CLTCL1P53675 TERC-201ENST00000602385 541 ntBASIC25.87■■□□□ 1.73
CLTCL1P53675 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CLTCL1P53675 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CLTCL1P53675 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC25.87■■□□□ 1.73
CLTCL1P53675 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
CLTCL1P53675 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC25.87■■□□□ 1.73
CLTCL1P53675 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC25.87■■□□□ 1.73
CLTCL1P53675 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
CLTCL1P53675 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CLTCL1P53675 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CLTCL1P53675 CENPM-204ENST00000402420 688 ntTSL 5 BASIC25.86■■□□□ 1.73
CLTCL1P53675 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
CLTCL1P53675 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC25.86■■□□□ 1.73
CLTCL1P53675 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC25.86■■□□□ 1.73
CLTCL1P53675 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC25.86■■□□□ 1.73
CLTCL1P53675 AD001527.2-201ENST00000622994 785 ntBASIC25.86■■□□□ 1.73
CLTCL1P53675 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
CLTCL1P53675 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
CLTCL1P53675 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
CLTCL1P53675 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC25.85■■□□□ 1.73
CLTCL1P53675 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CLTCL1P53675 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC25.85■■□□□ 1.73
CLTCL1P53675 MED15P5-201ENST00000423150 992 ntBASIC25.85■■□□□ 1.73
CLTCL1P53675 RNA5SP415-201ENST00000517246 115 ntBASIC25.85■■□□□ 1.73
CLTCL1P53675 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC25.85■■□□□ 1.73
CLTCL1P53675 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC25.85■■□□□ 1.73
CLTCL1P53675 SDCCAG3P1-201ENST00000589292 1150 ntBASIC25.85■■□□□ 1.73
CLTCL1P53675 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms