Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.59
NEK3P51956 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
NEK3P51956 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NEK3P51956 AL499627.1-201ENST00000569373 2188 ntBASIC18.76■□□□□ 0.59
NEK3P51956 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.76■□□□□ 0.59
NEK3P51956 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
NEK3P51956 MTMR9LP-203ENST00000426597 1545 ntBASIC18.76■□□□□ 0.59
NEK3P51956 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NEK3P51956 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NEK3P51956 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NEK3P51956 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NEK3P51956 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NEK3P51956 RASA4DP-201ENST00000460726 1199 ntBASIC18.76■□□□□ 0.59
NEK3P51956 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.76■□□□□ 0.59
NEK3P51956 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.76■□□□□ 0.59
NEK3P51956 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
NEK3P51956 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NEK3P51956 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NEK3P51956 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
NEK3P51956 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
NEK3P51956 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NEK3P51956 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NEK3P51956 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NEK3P51956 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NEK3P51956 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NEK3P51956 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NEK3P51956 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.75■□□□□ 0.59
NEK3P51956 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NEK3P51956 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NEK3P51956 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
NEK3P51956 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.75■□□□□ 0.59
NEK3P51956 KRT8P7-201ENST00000533003 1432 ntBASIC18.75■□□□□ 0.59
NEK3P51956 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NEK3P51956 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NEK3P51956 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
NEK3P51956 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.75■□□□□ 0.59
NEK3P51956 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.75■□□□□ 0.59
NEK3P51956 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NEK3P51956 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NEK3P51956 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
NEK3P51956 MIR564-202ENST00000385049 94 ntBASIC18.75■□□□□ 0.59
NEK3P51956 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.75■□□□□ 0.59
NEK3P51956 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.75■□□□□ 0.59
NEK3P51956 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.75■□□□□ 0.59
NEK3P51956 SEC1P-202ENST00000473944 940 ntBASIC18.75■□□□□ 0.59
NEK3P51956 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.75■□□□□ 0.59
NEK3P51956 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.75■□□□□ 0.59
NEK3P51956 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NEK3P51956 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
NEK3P51956 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.75■□□□□ 0.59
NEK3P51956 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NEK3P51956 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NEK3P51956 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NEK3P51956 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NEK3P51956 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.75■□□□□ 0.59
NEK3P51956 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NEK3P51956 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
NEK3P51956 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEK3P51956 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEK3P51956 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEK3P51956 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEK3P51956 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
NEK3P51956 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NEK3P51956 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
NEK3P51956 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.74■□□□□ 0.59
NEK3P51956 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NEK3P51956 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEK3P51956 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEK3P51956 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEK3P51956 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.74■□□□□ 0.59
NEK3P51956 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.74■□□□□ 0.59
NEK3P51956 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NEK3P51956 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEK3P51956 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEK3P51956 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEK3P51956 KRT18P23-201ENST00000435622 1283 ntBASIC18.74■□□□□ 0.59
NEK3P51956 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.74■□□□□ 0.59
NEK3P51956 FAM86EP-206ENST00000510506 987 ntBASIC18.74■□□□□ 0.59
NEK3P51956 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.74■□□□□ 0.59
NEK3P51956 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.74■□□□□ 0.59
NEK3P51956 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
NEK3P51956 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
NEK3P51956 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.74■□□□□ 0.59
NEK3P51956 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
NEK3P51956 AP000550.4-202ENST00000639755 178 ntBASIC18.74■□□□□ 0.59
NEK3P51956 AC068587.9-201ENST00000641814 219 ntBASIC18.74■□□□□ 0.59
NEK3P51956 ESPNP-201ENST00000270691 2015 ntBASIC18.74■□□□□ 0.59
NEK3P51956 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
NEK3P51956 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEK3P51956 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NEK3P51956 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
NEK3P51956 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.74■□□□□ 0.59
NEK3P51956 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NEK3P51956 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.74■□□□□ 0.59
NEK3P51956 LINC01311-201ENST00000565162 1445 ntBASIC18.74■□□□□ 0.59
NEK3P51956 HOXB1-202ENST00000577092 1414 ntBASIC18.74■□□□□ 0.59
NEK3P51956 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.73■□□□□ 0.59
NEK3P51956 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NEK3P51956 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NEK3P51956 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms