Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLCN3P51790 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.94■□□□□ 0.78
CLCN3P51790 KRT18P65-201ENST00000439811 1286 ntBASIC19.94■□□□□ 0.78
CLCN3P51790 FDX1P1-201ENST00000449115 551 ntBASIC19.94■□□□□ 0.78
CLCN3P51790 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.94■□□□□ 0.78
CLCN3P51790 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.94■□□□□ 0.78
CLCN3P51790 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.94■□□□□ 0.78
CLCN3P51790 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.94■□□□□ 0.78
CLCN3P51790 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLCN3P51790 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLCN3P51790 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CLCN3P51790 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.94■□□□□ 0.78
CLCN3P51790 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLCN3P51790 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.94■□□□□ 0.78
CLCN3P51790 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLCN3P51790 AC132938.6-201ENST00000623828 1655 ntBASIC19.94■□□□□ 0.78
CLCN3P51790 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CLCN3P51790 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CLCN3P51790 KRT8P10-201ENST00000450021 1447 ntBASIC19.93■□□□□ 0.78
CLCN3P51790 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLCN3P51790 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.93■□□□□ 0.78
CLCN3P51790 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.93■□□□□ 0.78
CLCN3P51790 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLCN3P51790 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLCN3P51790 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.93■□□□□ 0.78
CLCN3P51790 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLCN3P51790 POM121L3P-201ENST00000419331 1163 ntBASIC19.93■□□□□ 0.78
CLCN3P51790 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.93■□□□□ 0.78
CLCN3P51790 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CLCN3P51790 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLCN3P51790 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.93■□□□□ 0.78
CLCN3P51790 AC087289.5-201ENST00000586076 3175 ntBASIC19.93■□□□□ 0.78
CLCN3P51790 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CLCN3P51790 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLCN3P51790 AC073592.3-201ENST00000625118 1834 ntBASIC19.92■□□□□ 0.78
CLCN3P51790 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLCN3P51790 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.92■□□□□ 0.78
CLCN3P51790 AC093503.3-201ENST00000624917 2352 ntBASIC19.92■□□□□ 0.78
CLCN3P51790 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLCN3P51790 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLCN3P51790 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLCN3P51790 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLCN3P51790 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLCN3P51790 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.92■□□□□ 0.78
CLCN3P51790 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLCN3P51790 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
CLCN3P51790 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CLCN3P51790 AC114341.1-201ENST00000618070 349 ntBASIC19.92■□□□□ 0.78
CLCN3P51790 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CLCN3P51790 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLCN3P51790 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.92■□□□□ 0.78
CLCN3P51790 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLCN3P51790 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLCN3P51790 WIZP1-201ENST00000531444 2299 ntBASIC19.92■□□□□ 0.78
CLCN3P51790 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.92■□□□□ 0.78
CLCN3P51790 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLCN3P51790 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLCN3P51790 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.92■□□□□ 0.78
CLCN3P51790 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CLCN3P51790 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.92■□□□□ 0.78
CLCN3P51790 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLCN3P51790 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLCN3P51790 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLCN3P51790 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.91■□□□□ 0.78
CLCN3P51790 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
CLCN3P51790 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.91■□□□□ 0.78
CLCN3P51790 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLCN3P51790 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.91■□□□□ 0.78
CLCN3P51790 RCN1P2-201ENST00000398357 915 ntBASIC19.91■□□□□ 0.78
CLCN3P51790 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.91■□□□□ 0.78
CLCN3P51790 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.91■□□□□ 0.78
CLCN3P51790 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLCN3P51790 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.91■□□□□ 0.78
CLCN3P51790 MIR5100-201ENST00000579544 119 ntBASIC19.91■□□□□ 0.78
CLCN3P51790 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.91■□□□□ 0.78
CLCN3P51790 AL591684.3-201ENST00000605187 298 ntBASIC19.91■□□□□ 0.78
CLCN3P51790 REXO1L6P-202ENST00000619970 1078 ntBASIC19.91■□□□□ 0.78
CLCN3P51790 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLCN3P51790 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLCN3P51790 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLCN3P51790 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.91■□□□□ 0.78
CLCN3P51790 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.91■□□□□ 0.78
CLCN3P51790 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.91■□□□□ 0.78
CLCN3P51790 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLCN3P51790 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLCN3P51790 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
CLCN3P51790 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLCN3P51790 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLCN3P51790 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLCN3P51790 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.9■□□□□ 0.78
CLCN3P51790 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLCN3P51790 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLCN3P51790 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLCN3P51790 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLCN3P51790 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLCN3P51790 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.9■□□□□ 0.78
CLCN3P51790 SAPCD2P3-201ENST00000455031 850 ntBASIC19.9■□□□□ 0.78
CLCN3P51790 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.9■□□□□ 0.78
CLCN3P51790 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.9■□□□□ 0.78
CLCN3P51790 AL160237.2-201ENST00000556165 472 ntBASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms