Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CDC34P49427 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC34P49427 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CDC34P49427 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC34P49427 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDC34P49427 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC14.39□□□□□ -0.11
CDC34P49427 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC34P49427 GUK1-205ENST00000366722 850 ntTSL 3 BASIC14.39□□□□□ -0.11
CDC34P49427 AF201337.1-201ENST00000520239 748 ntBASIC14.39□□□□□ -0.11
CDC34P49427 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC14.39□□□□□ -0.11
CDC34P49427 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC34P49427 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC14.39□□□□□ -0.11
CDC34P49427 AL121832.2-201ENST00000610979 668 ntBASIC14.39□□□□□ -0.11
CDC34P49427 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
CDC34P49427 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDC34P49427 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC14.39□□□□□ -0.11
CDC34P49427 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC34P49427 AC011676.5-201ENST00000624864 2660 ntBASIC14.39□□□□□ -0.11
CDC34P49427 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC34P49427 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CDC34P49427 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.39□□□□□ -0.11
CDC34P49427 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC34P49427 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC34P49427 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC34P49427 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CDC34P49427 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDC34P49427 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC34P49427 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CDC34P49427 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC34P49427 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC34P49427 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC34P49427 HTR7P1-201ENST00000538670 1336 ntBASIC14.39□□□□□ -0.11
CDC34P49427 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CDC34P49427 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CDC34P49427 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CDC34P49427 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CDC34P49427 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC34P49427 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDC34P49427 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CDC34P49427 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CDC34P49427 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC34P49427 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDC34P49427 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CDC34P49427 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC34P49427 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.38□□□□□ -0.11
CDC34P49427 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC34P49427 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC34P49427 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC34P49427 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC14.38□□□□□ -0.11
CDC34P49427 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDC34P49427 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDC34P49427 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC14.38□□□□□ -0.11
CDC34P49427 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC14.38□□□□□ -0.11
CDC34P49427 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDC34P49427 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC14.38□□□□□ -0.11
CDC34P49427 C1QL1P1-201ENST00000568105 661 ntBASIC14.38□□□□□ -0.11
CDC34P49427 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CDC34P49427 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC14.38□□□□□ -0.11
CDC34P49427 AC120498.8-201ENST00000614275 531 ntBASIC14.38□□□□□ -0.11
CDC34P49427 MARS-234ENST00000630571 216 ntTSL 5 BASIC14.38□□□□□ -0.11
CDC34P49427 MARS-235ENST00000630803 183 ntTSL 3 BASIC14.38□□□□□ -0.11
CDC34P49427 AL391005.1-201ENST00000623953 2435 ntBASIC14.38□□□□□ -0.11
CDC34P49427 AP001094.4-201ENST00000579008 2176 ntBASIC14.38□□□□□ -0.11
CDC34P49427 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC34P49427 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CDC34P49427 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC14.38□□□□□ -0.11
CDC34P49427 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.38□□□□□ -0.11
CDC34P49427 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC34P49427 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDC34P49427 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CDC34P49427 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDC34P49427 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CDC34P49427 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC34P49427 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC34P49427 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CDC34P49427 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC14.38□□□□□ -0.11
CDC34P49427 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC34P49427 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC34P49427 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CDC34P49427 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CDC34P49427 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.38□□□□□ -0.11
CDC34P49427 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC34P49427 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.38□□□□□ -0.11
CDC34P49427 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC34P49427 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC34P49427 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC14.37□□□□□ -0.11
CDC34P49427 AL121761.2-201ENST00000598007 1648 ntBASIC14.37□□□□□ -0.11
CDC34P49427 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC34P49427 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC34P49427 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDC34P49427 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC34P49427 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC34P49427 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC34P49427 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC34P49427 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDC34P49427 AC007326.2-201ENST00000624224 7579 ntBASIC14.37□□□□□ -0.11
CDC34P49427 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDC34P49427 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC34P49427 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC34P49427 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms