Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
HTR3AP46098 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.81■□□□□ 0.28
HTR3AP46098 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HTR3AP46098 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HTR3AP46098 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.81■□□□□ 0.28
HTR3AP46098 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTR3AP46098 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTR3AP46098 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.81■□□□□ 0.28
HTR3AP46098 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTR3AP46098 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTR3AP46098 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTR3AP46098 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTR3AP46098 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTR3AP46098 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTR3AP46098 AC126763.1-201ENST00000552015 2118 ntBASIC16.81■□□□□ 0.28
HTR3AP46098 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTR3AP46098 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
HTR3AP46098 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.8■□□□□ 0.28
HTR3AP46098 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HTR3AP46098 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HTR3AP46098 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
HTR3AP46098 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HTR3AP46098 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HTR3AP46098 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
HTR3AP46098 KRT8P50-201ENST00000562022 1438 ntBASIC16.8■□□□□ 0.28
HTR3AP46098 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
HTR3AP46098 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HTR3AP46098 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HTR3AP46098 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
HTR3AP46098 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.8■□□□□ 0.28
HTR3AP46098 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HTR3AP46098 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.8■□□□□ 0.28
HTR3AP46098 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.8■□□□□ 0.28
HTR3AP46098 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HTR3AP46098 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HTR3AP46098 INGX-201ENST00000359239 846 ntBASIC16.8■□□□□ 0.28
HTR3AP46098 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HTR3AP46098 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HTR3AP46098 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.8■□□□□ 0.28
HTR3AP46098 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HTR3AP46098 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HTR3AP46098 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.8■□□□□ 0.28
HTR3AP46098 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.8■□□□□ 0.28
HTR3AP46098 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HTR3AP46098 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.8■□□□□ 0.28
HTR3AP46098 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.8■□□□□ 0.28
HTR3AP46098 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.8■□□□□ 0.28
HTR3AP46098 NEK4P2-201ENST00000580004 1012 ntBASIC16.8■□□□□ 0.28
HTR3AP46098 MIR3180-4-201ENST00000582223 153 ntBASIC16.8■□□□□ 0.28
HTR3AP46098 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.8■□□□□ 0.28
HTR3AP46098 AC112497.1-201ENST00000624824 639 ntBASIC16.8■□□□□ 0.28
HTR3AP46098 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HTR3AP46098 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.8■□□□□ 0.28
HTR3AP46098 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.8■□□□□ 0.28
HTR3AP46098 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.8■□□□□ 0.28
HTR3AP46098 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.8■□□□□ 0.28
HTR3AP46098 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.8■□□□□ 0.28
HTR3AP46098 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HTR3AP46098 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HTR3AP46098 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HTR3AP46098 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.79■□□□□ 0.28
HTR3AP46098 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.79■□□□□ 0.28
HTR3AP46098 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HTR3AP46098 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HTR3AP46098 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
HTR3AP46098 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HTR3AP46098 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.79■□□□□ 0.28
HTR3AP46098 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HTR3AP46098 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.79■□□□□ 0.28
HTR3AP46098 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
HTR3AP46098 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HTR3AP46098 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HTR3AP46098 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HTR3AP46098 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
HTR3AP46098 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.79■□□□□ 0.28
HTR3AP46098 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HTR3AP46098 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.79■□□□□ 0.28
HTR3AP46098 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HTR3AP46098 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.79■□□□□ 0.28
HTR3AP46098 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
HTR3AP46098 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
HTR3AP46098 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.79■□□□□ 0.28
HTR3AP46098 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HTR3AP46098 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HTR3AP46098 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
HTR3AP46098 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
HTR3AP46098 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HTR3AP46098 ESPNP-201ENST00000270691 2015 ntBASIC16.79■□□□□ 0.28
HTR3AP46098 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HTR3AP46098 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HTR3AP46098 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HTR3AP46098 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HTR3AP46098 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HTR3AP46098 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
HTR3AP46098 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HTR3AP46098 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
HTR3AP46098 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
HTR3AP46098 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
HTR3AP46098 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
HTR3AP46098 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms