Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA4P43681 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.36■□□□□ 0.53
CHRNA4P43681 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.36■□□□□ 0.53
CHRNA4P43681 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA4P43681 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA4P43681 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA4P43681 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.36■□□□□ 0.53
CHRNA4P43681 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.36■□□□□ 0.53
CHRNA4P43681 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CHRNA4P43681 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CHRNA4P43681 AC093010.1-201ENST00000473625 1624 ntBASIC18.36■□□□□ 0.53
CHRNA4P43681 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA4P43681 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.36■□□□□ 0.53
CHRNA4P43681 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.36■□□□□ 0.53
CHRNA4P43681 AC138028.4-201ENST00000564984 1845 ntBASIC18.36■□□□□ 0.53
CHRNA4P43681 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CHRNA4P43681 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA4P43681 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.36■□□□□ 0.53
CHRNA4P43681 AC005332.8-201ENST00000622750 2735 ntBASIC18.36■□□□□ 0.53
CHRNA4P43681 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CHRNA4P43681 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA4P43681 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CHRNA4P43681 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA4P43681 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA4P43681 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.35■□□□□ 0.53
CHRNA4P43681 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.35■□□□□ 0.53
CHRNA4P43681 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA4P43681 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA4P43681 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.35■□□□□ 0.53
CHRNA4P43681 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CHRNA4P43681 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA4P43681 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA4P43681 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.35■□□□□ 0.53
CHRNA4P43681 DUX4L26-201ENST00000489078 1255 ntBASIC18.35■□□□□ 0.53
CHRNA4P43681 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA4P43681 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA4P43681 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.35■□□□□ 0.53
CHRNA4P43681 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA4P43681 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.35■□□□□ 0.53
CHRNA4P43681 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CHRNA4P43681 AC068880.1-201ENST00000507289 2297 ntBASIC18.35■□□□□ 0.53
CHRNA4P43681 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA4P43681 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CHRNA4P43681 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA4P43681 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA4P43681 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CHRNA4P43681 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA4P43681 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.35■□□□□ 0.53
CHRNA4P43681 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.35■□□□□ 0.53
CHRNA4P43681 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA4P43681 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA4P43681 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.34■□□□□ 0.53
CHRNA4P43681 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA4P43681 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA4P43681 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA4P43681 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CHRNA4P43681 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA4P43681 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA4P43681 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA4P43681 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA4P43681 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA4P43681 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.34■□□□□ 0.53
CHRNA4P43681 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
CHRNA4P43681 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA4P43681 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA4P43681 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA4P43681 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA4P43681 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA4P43681 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA4P43681 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA4P43681 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
CHRNA4P43681 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.34■□□□□ 0.53
CHRNA4P43681 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.34■□□□□ 0.53
CHRNA4P43681 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA4P43681 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA4P43681 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CHRNA4P43681 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.34■□□□□ 0.53
CHRNA4P43681 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA4P43681 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA4P43681 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA4P43681 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CHRNA4P43681 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA4P43681 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA4P43681 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA4P43681 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA4P43681 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.33■□□□□ 0.53
CHRNA4P43681 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHRNA4P43681 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHRNA4P43681 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CHRNA4P43681 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.53
CHRNA4P43681 NOC2LP2-201ENST00000407594 1944 ntBASIC18.33■□□□□ 0.53
CHRNA4P43681 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CHRNA4P43681 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHRNA4P43681 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CHRNA4P43681 AC067852.2-201ENST00000590513 2313 ntBASIC18.33■□□□□ 0.53
CHRNA4P43681 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CHRNA4P43681 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CHRNA4P43681 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHRNA4P43681 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA4P43681 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms