Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SOX11P35716 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SOX11P35716 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SOX11P35716 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SOX11P35716 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SOX11P35716 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SOX11P35716 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SOX11P35716 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SOX11P35716 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SOX11P35716 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
SOX11P35716 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.81■□□□□ 0.44
SOX11P35716 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SOX11P35716 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SOX11P35716 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
SOX11P35716 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
SOX11P35716 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SOX11P35716 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SOX11P35716 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SOX11P35716 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SOX11P35716 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SOX11P35716 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.8■□□□□ 0.44
SOX11P35716 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SOX11P35716 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SOX11P35716 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SOX11P35716 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SOX11P35716 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.8■□□□□ 0.44
SOX11P35716 HMGA1P5-201ENST00000412453 271 ntBASIC17.8■□□□□ 0.44
SOX11P35716 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
SOX11P35716 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.8■□□□□ 0.44
SOX11P35716 ATP5G1P1-201ENST00000448724 379 ntBASIC17.8■□□□□ 0.44
SOX11P35716 DUX4L26-201ENST00000489078 1255 ntBASIC17.8■□□□□ 0.44
SOX11P35716 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.8■□□□□ 0.44
SOX11P35716 AC006011.2-201ENST00000621313 1158 ntBASIC17.8■□□□□ 0.44
SOX11P35716 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SOX11P35716 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SOX11P35716 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SOX11P35716 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.8■□□□□ 0.44
SOX11P35716 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SOX11P35716 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.8■□□□□ 0.44
SOX11P35716 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SOX11P35716 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SOX11P35716 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SOX11P35716 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.79■□□□□ 0.44
SOX11P35716 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SOX11P35716 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SOX11P35716 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SOX11P35716 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SOX11P35716 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SOX11P35716 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SOX11P35716 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SOX11P35716 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.79■□□□□ 0.44
SOX11P35716 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SOX11P35716 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.79■□□□□ 0.44
SOX11P35716 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SOX11P35716 ARMC10P1-201ENST00000313754 855 ntBASIC17.79■□□□□ 0.44
SOX11P35716 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SOX11P35716 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.79■□□□□ 0.44
SOX11P35716 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
SOX11P35716 CCR12P-201ENST00000446203 998 ntBASIC17.79■□□□□ 0.44
SOX11P35716 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SOX11P35716 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
SOX11P35716 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.79■□□□□ 0.44
SOX11P35716 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SOX11P35716 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SOX11P35716 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SOX11P35716 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SOX11P35716 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SOX11P35716 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SOX11P35716 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SOX11P35716 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SOX11P35716 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SOX11P35716 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX11P35716 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX11P35716 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SOX11P35716 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX11P35716 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX11P35716 KRT8P41-201ENST00000533985 1514 ntBASIC17.78■□□□□ 0.44
SOX11P35716 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.78■□□□□ 0.44
SOX11P35716 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.78■□□□□ 0.44
SOX11P35716 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.78■□□□□ 0.44
SOX11P35716 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SOX11P35716 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SOX11P35716 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX11P35716 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX11P35716 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SOX11P35716 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SOX11P35716 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SOX11P35716 TSPY23P-201ENST00000440136 739 ntBASIC17.78■□□□□ 0.44
SOX11P35716 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.78■□□□□ 0.44
SOX11P35716 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.78■□□□□ 0.44
SOX11P35716 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SOX11P35716 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.78■□□□□ 0.44
SOX11P35716 AL023803.3-201ENST00000615559 522 ntBASIC17.78■□□□□ 0.44
SOX11P35716 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.78■□□□□ 0.44
SOX11P35716 AC010653.2-201ENST00000623505 997 ntBASIC17.78■□□□□ 0.44
SOX11P35716 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX11P35716 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.78■□□□□ 0.44
SOX11P35716 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SOX11P35716 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SOX11P35716 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms