Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.41■□□□□ 0.54
RPA3P35244 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RPA3P35244 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPA3P35244 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPA3P35244 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RPA3P35244 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPA3P35244 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPA3P35244 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPA3P35244 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
RPA3P35244 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RPA3P35244 MFAP1P1-201ENST00000442257 1255 ntBASIC18.41■□□□□ 0.54
RPA3P35244 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.41■□□□□ 0.54
RPA3P35244 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RPA3P35244 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.41■□□□□ 0.54
RPA3P35244 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RPA3P35244 CKBP1-201ENST00000565489 1086 ntBASIC18.41■□□□□ 0.54
RPA3P35244 AP000525.1-201ENST00000608286 694 ntBASIC18.41■□□□□ 0.54
RPA3P35244 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPA3P35244 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
RPA3P35244 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPA3P35244 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RPA3P35244 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPA3P35244 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
RPA3P35244 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
RPA3P35244 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.41■□□□□ 0.54
RPA3P35244 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPA3P35244 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RPA3P35244 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPA3P35244 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPA3P35244 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.4■□□□□ 0.54
RPA3P35244 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RPA3P35244 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.4■□□□□ 0.54
RPA3P35244 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPA3P35244 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RPA3P35244 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
RPA3P35244 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPA3P35244 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.4■□□□□ 0.54
RPA3P35244 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPA3P35244 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.4■□□□□ 0.54
RPA3P35244 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RPA3P35244 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPA3P35244 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.4■□□□□ 0.54
RPA3P35244 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RPA3P35244 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPA3P35244 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RPA3P35244 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPA3P35244 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPA3P35244 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPA3P35244 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPA3P35244 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RPA3P35244 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPA3P35244 AC141586.5-201ENST00000624546 2050 ntBASIC18.4■□□□□ 0.54
RPA3P35244 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPA3P35244 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPA3P35244 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
RPA3P35244 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.39■□□□□ 0.54
RPA3P35244 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RPA3P35244 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
RPA3P35244 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPA3P35244 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RPA3P35244 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPA3P35244 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPA3P35244 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPA3P35244 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPA3P35244 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPA3P35244 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
RPA3P35244 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPA3P35244 MIR1238-201ENST00000408483 83 ntBASIC18.39■□□□□ 0.53
RPA3P35244 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.39■□□□□ 0.53
RPA3P35244 KRT18P41-201ENST00000518924 1277 ntBASIC18.39■□□□□ 0.53
RPA3P35244 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.39■□□□□ 0.53
RPA3P35244 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPA3P35244 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
RPA3P35244 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.39■□□□□ 0.53
RPA3P35244 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPA3P35244 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPA3P35244 PHGDH-209ENST00000641074 1780 ntBASIC18.39■□□□□ 0.53
RPA3P35244 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPA3P35244 AC096733.2-201ENST00000609937 1394 ntBASIC18.39■□□□□ 0.53
RPA3P35244 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RPA3P35244 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPA3P35244 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPA3P35244 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPA3P35244 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPA3P35244 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPA3P35244 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.38■□□□□ 0.53
RPA3P35244 TSPY15P-201ENST00000457163 923 ntBASIC18.38■□□□□ 0.53
RPA3P35244 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RPA3P35244 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RPA3P35244 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.38■□□□□ 0.53
RPA3P35244 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RPA3P35244 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPA3P35244 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.38■□□□□ 0.53
RPA3P35244 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RPA3P35244 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.38■□□□□ 0.53
RPA3P35244 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPA3P35244 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.37■□□□□ 0.53
RPA3P35244 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.37■□□□□ 0.53
RPA3P35244 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
RPA3P35244 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms