Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HTR1EP28566 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.44■□□□□ 0.38
HTR1EP28566 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HTR1EP28566 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.44■□□□□ 0.38
HTR1EP28566 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.44■□□□□ 0.38
HTR1EP28566 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HTR1EP28566 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
HTR1EP28566 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HTR1EP28566 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HTR1EP28566 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HTR1EP28566 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HTR1EP28566 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HTR1EP28566 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.44■□□□□ 0.38
HTR1EP28566 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HTR1EP28566 FSCN1P1-201ENST00000568912 1481 ntBASIC17.44■□□□□ 0.38
HTR1EP28566 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
HTR1EP28566 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1EP28566 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
HTR1EP28566 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1EP28566 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1EP28566 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1EP28566 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1EP28566 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1EP28566 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1EP28566 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1EP28566 RCC2P3-201ENST00000418112 1537 ntBASIC17.43■□□□□ 0.38
HTR1EP28566 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1EP28566 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.43■□□□□ 0.38
HTR1EP28566 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
HTR1EP28566 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1EP28566 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1EP28566 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.43■□□□□ 0.38
HTR1EP28566 AK4P3-201ENST00000418260 669 ntBASIC17.43■□□□□ 0.38
HTR1EP28566 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1EP28566 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.43■□□□□ 0.38
HTR1EP28566 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
HTR1EP28566 EGLN1P1-201ENST00000531623 762 ntBASIC17.43■□□□□ 0.38
HTR1EP28566 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.43■□□□□ 0.38
HTR1EP28566 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
HTR1EP28566 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.43■□□□□ 0.38
HTR1EP28566 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
HTR1EP28566 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.43■□□□□ 0.38
HTR1EP28566 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1EP28566 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1EP28566 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1EP28566 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.43■□□□□ 0.38
HTR1EP28566 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1EP28566 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1EP28566 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1EP28566 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.43■□□□□ 0.38
HTR1EP28566 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.43■□□□□ 0.38
HTR1EP28566 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1EP28566 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.43■□□□□ 0.38
HTR1EP28566 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1EP28566 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTR1EP28566 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTR1EP28566 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.42■□□□□ 0.38
HTR1EP28566 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTR1EP28566 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.42■□□□□ 0.38
HTR1EP28566 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
HTR1EP28566 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
HTR1EP28566 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.42■□□□□ 0.38
HTR1EP28566 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.42■□□□□ 0.38
HTR1EP28566 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HTR1EP28566 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.42■□□□□ 0.38
HTR1EP28566 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HTR1EP28566 AC128688.1-201ENST00000487626 519 ntBASIC17.42■□□□□ 0.38
HTR1EP28566 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HTR1EP28566 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.42■□□□□ 0.38
HTR1EP28566 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTR1EP28566 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HTR1EP28566 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.42■□□□□ 0.38
HTR1EP28566 AL358472.4-201ENST00000633140 710 ntBASIC17.42■□□□□ 0.38
HTR1EP28566 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
HTR1EP28566 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.42■□□□□ 0.38
HTR1EP28566 AL096828.2-201ENST00000567259 1965 ntBASIC17.42■□□□□ 0.38
HTR1EP28566 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
HTR1EP28566 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
HTR1EP28566 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
HTR1EP28566 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.42■□□□□ 0.38
HTR1EP28566 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.42■□□□□ 0.38
HTR1EP28566 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HTR1EP28566 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTR1EP28566 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.42■□□□□ 0.38
HTR1EP28566 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTR1EP28566 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
HTR1EP28566 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1EP28566 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1EP28566 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1EP28566 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
HTR1EP28566 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1EP28566 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1EP28566 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1EP28566 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1EP28566 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1EP28566 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1EP28566 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
HTR1EP28566 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1EP28566 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
HTR1EP28566 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms