Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN3P20807 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN3P20807 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN3P20807 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN3P20807 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.53■□□□□ 0.4
CAPN3P20807 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.53■□□□□ 0.4
CAPN3P20807 MIR6786-201ENST00000616843 113 ntBASIC17.53■□□□□ 0.4
CAPN3P20807 CR392000.1-201ENST00000624770 1228 ntBASIC17.53■□□□□ 0.4
CAPN3P20807 AL031985.4-201ENST00000642138 673 ntBASIC17.53■□□□□ 0.4
CAPN3P20807 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN3P20807 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.53■□□□□ 0.4
CAPN3P20807 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
CAPN3P20807 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN3P20807 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CAPN3P20807 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.53■□□□□ 0.4
CAPN3P20807 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CAPN3P20807 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CAPN3P20807 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN3P20807 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN3P20807 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN3P20807 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.52■□□□□ 0.4
CAPN3P20807 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
CAPN3P20807 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.52■□□□□ 0.4
CAPN3P20807 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN3P20807 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN3P20807 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN3P20807 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN3P20807 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN3P20807 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN3P20807 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.52■□□□□ 0.4
CAPN3P20807 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CAPN3P20807 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN3P20807 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN3P20807 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN3P20807 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN3P20807 AC005521.1-201ENST00000393351 872 ntBASIC17.52■□□□□ 0.4
CAPN3P20807 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.52■□□□□ 0.4
CAPN3P20807 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.52■□□□□ 0.4
CAPN3P20807 B3GAT3P1-201ENST00000471720 806 ntBASIC17.52■□□□□ 0.4
CAPN3P20807 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.52■□□□□ 0.4
CAPN3P20807 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.52■□□□□ 0.4
CAPN3P20807 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.52■□□□□ 0.4
CAPN3P20807 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.52■□□□□ 0.4
CAPN3P20807 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN3P20807 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CAPN3P20807 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CAPN3P20807 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
CAPN3P20807 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CAPN3P20807 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CAPN3P20807 PCDHA12-202ENST00000613593 2588 ntBASIC17.52■□□□□ 0.39
CAPN3P20807 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CAPN3P20807 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CAPN3P20807 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.52■□□□□ 0.39
CAPN3P20807 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CAPN3P20807 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CAPN3P20807 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.52■□□□□ 0.39
CAPN3P20807 AC099398.1-201ENST00000567919 2776 ntBASIC17.51■□□□□ 0.39
CAPN3P20807 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.51■□□□□ 0.39
CAPN3P20807 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.51■□□□□ 0.39
CAPN3P20807 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN3P20807 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.51■□□□□ 0.39
CAPN3P20807 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.51■□□□□ 0.39
CAPN3P20807 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN3P20807 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN3P20807 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.51■□□□□ 0.39
CAPN3P20807 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN3P20807 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
CAPN3P20807 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN3P20807 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN3P20807 AC113347.1-201ENST00000413321 391 ntBASIC17.51■□□□□ 0.39
CAPN3P20807 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CAPN3P20807 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.51■□□□□ 0.39
CAPN3P20807 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.51■□□□□ 0.39
CAPN3P20807 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CAPN3P20807 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.51■□□□□ 0.39
CAPN3P20807 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
CAPN3P20807 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.51■□□□□ 0.39
CAPN3P20807 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN3P20807 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.51■□□□□ 0.39
CAPN3P20807 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN3P20807 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN3P20807 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.51■□□□□ 0.39
CAPN3P20807 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN3P20807 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN3P20807 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN3P20807 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN3P20807 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CAPN3P20807 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CAPN3P20807 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN3P20807 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN3P20807 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.5■□□□□ 0.39
CAPN3P20807 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.5■□□□□ 0.39
CAPN3P20807 AC034236.2-201ENST00000606662 1610 ntBASIC17.5■□□□□ 0.39
CAPN3P20807 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.5■□□□□ 0.39
CAPN3P20807 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN3P20807 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.5■□□□□ 0.39
CAPN3P20807 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN3P20807 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN3P20807 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CAPN3P20807 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms