Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 AC090340.1-201ENST00000620778 4980 ntBASIC18.31■□□□□ 0.52
VCLP18206 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
VCLP18206 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.31■□□□□ 0.52
VCLP18206 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VCLP18206 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VCLP18206 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VCLP18206 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
VCLP18206 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.3■□□□□ 0.52
VCLP18206 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
VCLP18206 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VCLP18206 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VCLP18206 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VCLP18206 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VCLP18206 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.3■□□□□ 0.52
VCLP18206 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.3■□□□□ 0.52
VCLP18206 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
VCLP18206 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VCLP18206 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.3■□□□□ 0.52
VCLP18206 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VCLP18206 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VCLP18206 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.3■□□□□ 0.52
VCLP18206 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VCLP18206 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VCLP18206 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.3■□□□□ 0.52
VCLP18206 MYC-208ENST00000641036 567 ntBASIC18.3■□□□□ 0.52
VCLP18206 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VCLP18206 HOXB1-202ENST00000577092 1414 ntBASIC18.3■□□□□ 0.52
VCLP18206 AL357033.4-201ENST00000617703 1807 ntBASIC18.3■□□□□ 0.52
VCLP18206 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
VCLP18206 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VCLP18206 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VCLP18206 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
VCLP18206 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.29■□□□□ 0.52
VCLP18206 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.29■□□□□ 0.52
VCLP18206 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VCLP18206 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
VCLP18206 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
VCLP18206 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VCLP18206 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.29■□□□□ 0.52
VCLP18206 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.29■□□□□ 0.52
VCLP18206 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VCLP18206 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VCLP18206 AL441883.1-201ENST00000566170 1045 ntBASIC18.29■□□□□ 0.52
VCLP18206 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.29■□□□□ 0.52
VCLP18206 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
VCLP18206 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VCLP18206 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.29■□□□□ 0.52
VCLP18206 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
VCLP18206 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
VCLP18206 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
VCLP18206 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.29■□□□□ 0.52
VCLP18206 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
VCLP18206 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VCLP18206 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.29■□□□□ 0.52
VCLP18206 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
VCLP18206 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VCLP18206 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VCLP18206 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VCLP18206 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VCLP18206 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.28■□□□□ 0.52
VCLP18206 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
VCLP18206 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VCLP18206 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VCLP18206 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.28■□□□□ 0.52
VCLP18206 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
VCLP18206 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
VCLP18206 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VCLP18206 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VCLP18206 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
VCLP18206 FAM8A6P-201ENST00000407496 1135 ntBASIC18.28■□□□□ 0.52
VCLP18206 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.28■□□□□ 0.52
VCLP18206 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.28■□□□□ 0.52
VCLP18206 GCSHP2-201ENST00000560971 527 ntBASIC18.28■□□□□ 0.52
VCLP18206 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
VCLP18206 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
VCLP18206 AC024243.1-201ENST00000609234 778 ntBASIC18.28■□□□□ 0.52
VCLP18206 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.28■□□□□ 0.52
VCLP18206 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VCLP18206 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VCLP18206 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
VCLP18206 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
VCLP18206 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
VCLP18206 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
VCLP18206 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VCLP18206 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VCLP18206 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VCLP18206 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VCLP18206 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
VCLP18206 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VCLP18206 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VCLP18206 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
VCLP18206 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VCLP18206 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
VCLP18206 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VCLP18206 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
VCLP18206 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VCLP18206 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.27■□□□□ 0.52
VCLP18206 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VCLP18206 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
VCLP18206 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms