Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
PTPN1P18031 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN1P18031 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PTPN1P18031 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN1P18031 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN1P18031 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN1P18031 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.22■□□□□ 0.67
PTPN1P18031 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN1P18031 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PTPN1P18031 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.22■□□□□ 0.67
PTPN1P18031 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN1P18031 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN1P18031 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PTPN1P18031 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN1P18031 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.22■□□□□ 0.67
PTPN1P18031 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.22■□□□□ 0.67
PTPN1P18031 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.22■□□□□ 0.67
PTPN1P18031 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PTPN1P18031 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.22■□□□□ 0.67
PTPN1P18031 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN1P18031 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.22■□□□□ 0.67
PTPN1P18031 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.22■□□□□ 0.67
PTPN1P18031 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.22■□□□□ 0.67
PTPN1P18031 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN1P18031 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.22■□□□□ 0.67
PTPN1P18031 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN1P18031 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN1P18031 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN1P18031 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.22■□□□□ 0.67
PTPN1P18031 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.22■□□□□ 0.67
PTPN1P18031 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN1P18031 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN1P18031 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
PTPN1P18031 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN1P18031 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN1P18031 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
PTPN1P18031 AC104581.1-202ENST00000635932 2618 ntBASIC19.21■□□□□ 0.67
PTPN1P18031 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN1P18031 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.21■□□□□ 0.67
PTPN1P18031 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN1P18031 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PTPN1P18031 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN1P18031 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.21■□□□□ 0.67
PTPN1P18031 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN1P18031 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN1P18031 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PTPN1P18031 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
PTPN1P18031 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PTPN1P18031 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN1P18031 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN1P18031 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPN1P18031 LINC00265-3P-201ENST00000447588 903 ntBASIC19.21■□□□□ 0.67
PTPN1P18031 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN1P18031 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN1P18031 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPN1P18031 AC093677.2-201ENST00000600169 1863 ntBASIC19.21■□□□□ 0.67
PTPN1P18031 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
PTPN1P18031 AC009154.2-201ENST00000621177 724 ntBASIC19.21■□□□□ 0.67
PTPN1P18031 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN1P18031 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN1P18031 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN1P18031 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPN1P18031 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN1P18031 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PTPN1P18031 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN1P18031 AC135776.1-201ENST00000319817 2481 ntBASIC19.2■□□□□ 0.66
PTPN1P18031 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.2■□□□□ 0.66
PTPN1P18031 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN1P18031 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
PTPN1P18031 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN1P18031 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN1P18031 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN1P18031 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.2■□□□□ 0.66
PTPN1P18031 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN1P18031 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PTPN1P18031 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN1P18031 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN1P18031 TOB2P1-201ENST00000469761 992 ntBASIC19.2■□□□□ 0.66
PTPN1P18031 AC068472.1-201ENST00000474589 881 ntBASIC19.2■□□□□ 0.66
PTPN1P18031 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.2■□□□□ 0.66
PTPN1P18031 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PTPN1P18031 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
PTPN1P18031 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN1P18031 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.2■□□□□ 0.66
PTPN1P18031 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN1P18031 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN1P18031 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN1P18031 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.2■□□□□ 0.66
PTPN1P18031 AC132938.6-201ENST00000623828 1655 ntBASIC19.2■□□□□ 0.66
PTPN1P18031 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PTPN1P18031 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
PTPN1P18031 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN1P18031 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN1P18031 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN1P18031 AC009113.1-201ENST00000570267 2443 ntBASIC19.2■□□□□ 0.66
PTPN1P18031 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PTPN1P18031 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN1P18031 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN1P18031 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
PTPN1P18031 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms