Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.85■□□□□ 0.29
UBL4AP11441 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBL4AP11441 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
UBL4AP11441 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
UBL4AP11441 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBL4AP11441 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.85■□□□□ 0.29
UBL4AP11441 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBL4AP11441 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBL4AP11441 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UBL4AP11441 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.85■□□□□ 0.29
UBL4AP11441 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UBL4AP11441 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
UBL4AP11441 GMCL1P1-201ENST00000463439 1581 ntBASIC16.85■□□□□ 0.29
UBL4AP11441 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBL4AP11441 AC099343.3-201ENST00000605834 2503 ntBASIC16.85■□□□□ 0.29
UBL4AP11441 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
UBL4AP11441 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.84■□□□□ 0.29
UBL4AP11441 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBL4AP11441 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBL4AP11441 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBL4AP11441 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
UBL4AP11441 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.84■□□□□ 0.29
UBL4AP11441 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UBL4AP11441 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBL4AP11441 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBL4AP11441 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
UBL4AP11441 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.84■□□□□ 0.29
UBL4AP11441 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.84■□□□□ 0.29
UBL4AP11441 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
UBL4AP11441 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.84■□□□□ 0.29
UBL4AP11441 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
UBL4AP11441 AC010203.1-204ENST00000548782 407 ntBASIC16.84■□□□□ 0.29
UBL4AP11441 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.84■□□□□ 0.29
UBL4AP11441 AL138966.2-201ENST00000621997 464 ntBASIC16.84■□□□□ 0.29
UBL4AP11441 AC092865.7-201ENST00000641832 219 ntBASIC16.84■□□□□ 0.29
UBL4AP11441 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
UBL4AP11441 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UBL4AP11441 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
UBL4AP11441 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
UBL4AP11441 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UBL4AP11441 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBL4AP11441 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
UBL4AP11441 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UBL4AP11441 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UBL4AP11441 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
UBL4AP11441 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBL4AP11441 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.84■□□□□ 0.29
UBL4AP11441 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.84■□□□□ 0.29
UBL4AP11441 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.83■□□□□ 0.29
UBL4AP11441 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
UBL4AP11441 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
UBL4AP11441 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
UBL4AP11441 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
UBL4AP11441 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
UBL4AP11441 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBL4AP11441 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBL4AP11441 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBL4AP11441 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBL4AP11441 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBL4AP11441 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.83■□□□□ 0.28
UBL4AP11441 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
UBL4AP11441 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBL4AP11441 AL137013.1-201ENST00000432946 1228 ntBASIC16.83■□□□□ 0.28
UBL4AP11441 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.83■□□□□ 0.28
UBL4AP11441 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.83■□□□□ 0.28
UBL4AP11441 SDHAP2-201ENST00000455183 2001 ntBASIC16.83■□□□□ 0.28
UBL4AP11441 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.83■□□□□ 0.28
UBL4AP11441 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
UBL4AP11441 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.83■□□□□ 0.28
UBL4AP11441 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.83■□□□□ 0.28
UBL4AP11441 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.83■□□□□ 0.28
UBL4AP11441 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBL4AP11441 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
UBL4AP11441 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBL4AP11441 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBL4AP11441 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBL4AP11441 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
UBL4AP11441 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
UBL4AP11441 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
UBL4AP11441 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
UBL4AP11441 ABALON-201ENST00000629058 1903 ntBASIC16.82■□□□□ 0.28
UBL4AP11441 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBL4AP11441 AL354751.1-201ENST00000412768 1863 ntBASIC16.82■□□□□ 0.28
UBL4AP11441 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
UBL4AP11441 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBL4AP11441 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.82■□□□□ 0.28
UBL4AP11441 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
UBL4AP11441 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
UBL4AP11441 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBL4AP11441 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBL4AP11441 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
UBL4AP11441 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBL4AP11441 AC211429.1-201ENST00000415277 523 ntBASIC16.82■□□□□ 0.28
UBL4AP11441 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.82■□□□□ 0.28
UBL4AP11441 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBL4AP11441 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBL4AP11441 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBL4AP11441 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.82■□□□□ 0.28
UBL4AP11441 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
UBL4AP11441 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms