Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PTPRFP10586 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.78■□□□□ 0.92
PTPRFP10586 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTPRFP10586 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
PTPRFP10586 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTPRFP10586 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
PTPRFP10586 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
PTPRFP10586 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTPRFP10586 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTPRFP10586 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PTPRFP10586 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PTPRFP10586 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
PTPRFP10586 AC009947.1-201ENST00000444350 727 ntBASIC20.78■□□□□ 0.92
PTPRFP10586 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
PTPRFP10586 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.78■□□□□ 0.92
PTPRFP10586 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PTPRFP10586 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
PTPRFP10586 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.77■□□□□ 0.92
PTPRFP10586 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PTPRFP10586 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTPRFP10586 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTPRFP10586 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
PTPRFP10586 AC108751.1-201ENST00000490852 363 ntBASIC20.77■□□□□ 0.92
PTPRFP10586 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.77■□□□□ 0.92
PTPRFP10586 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.77■□□□□ 0.92
PTPRFP10586 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.77■□□□□ 0.92
PTPRFP10586 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
PTPRFP10586 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.77■□□□□ 0.92
PTPRFP10586 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
PTPRFP10586 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.77■□□□□ 0.92
PTPRFP10586 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
PTPRFP10586 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PTPRFP10586 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PTPRFP10586 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTPRFP10586 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTPRFP10586 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.77■□□□□ 0.92
PTPRFP10586 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.77■□□□□ 0.91
PTPRFP10586 AC002310.6-201ENST00000624451 1377 ntBASIC20.77■□□□□ 0.91
PTPRFP10586 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPRFP10586 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.76■□□□□ 0.91
PTPRFP10586 RNA5SP416-201ENST00000516838 111 ntBASIC20.76■□□□□ 0.91
PTPRFP10586 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC20.76■□□□□ 0.91
PTPRFP10586 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPRFP10586 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PTPRFP10586 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PTPRFP10586 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPRFP10586 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PTPRFP10586 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPRFP10586 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPRFP10586 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.76■□□□□ 0.91
PTPRFP10586 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PTPRFP10586 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.76■□□□□ 0.91
PTPRFP10586 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.76■□□□□ 0.91
PTPRFP10586 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.76■□□□□ 0.91
PTPRFP10586 MIR1199-201ENST00000621445 119 ntBASIC20.76■□□□□ 0.91
PTPRFP10586 AC073592.4-201ENST00000623827 446 ntBASIC20.76■□□□□ 0.91
PTPRFP10586 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.76■□□□□ 0.91
PTPRFP10586 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPRFP10586 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPRFP10586 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PTPRFP10586 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PTPRFP10586 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.75■□□□□ 0.91
PTPRFP10586 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
PTPRFP10586 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PTPRFP10586 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPRFP10586 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.75■□□□□ 0.91
PTPRFP10586 AC004967.1-201ENST00000453589 447 ntBASIC20.75■□□□□ 0.91
PTPRFP10586 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.75■□□□□ 0.91
PTPRFP10586 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPRFP10586 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.75■□□□□ 0.91
PTPRFP10586 AD001527.2-201ENST00000622994 785 ntBASIC20.75■□□□□ 0.91
PTPRFP10586 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPRFP10586 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPRFP10586 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPRFP10586 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPRFP10586 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.75■□□□□ 0.91
PTPRFP10586 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PTPRFP10586 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PTPRFP10586 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPRFP10586 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPRFP10586 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.74■□□□□ 0.91
PTPRFP10586 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PTPRFP10586 ELK2BP-201ENST00000415014 1224 ntBASIC20.74■□□□□ 0.91
PTPRFP10586 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PTPRFP10586 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PTPRFP10586 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
PTPRFP10586 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.74■□□□□ 0.91
PTPRFP10586 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PTPRFP10586 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.74■□□□□ 0.91
PTPRFP10586 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPRFP10586 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.74■□□□□ 0.91
PTPRFP10586 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.74■□□□□ 0.91
PTPRFP10586 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
PTPRFP10586 AC023274.1-201ENST00000418278 595 ntBASIC20.74■□□□□ 0.91
PTPRFP10586 RPS8P6-201ENST00000426177 609 ntBASIC20.74■□□□□ 0.91
PTPRFP10586 DNAJB3-201ENST00000446806 729 ntBASIC20.74■□□□□ 0.91
PTPRFP10586 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.74■□□□□ 0.91
PTPRFP10586 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC20.74■□□□□ 0.91
PTPRFP10586 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.74■□□□□ 0.91
PTPRFP10586 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms