Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RARAP10276 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.1■□□□□ 0.65
RARAP10276 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.1■□□□□ 0.65
RARAP10276 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RARAP10276 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RARAP10276 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RARAP10276 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.1■□□□□ 0.65
RARAP10276 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
RARAP10276 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.1■□□□□ 0.65
RARAP10276 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RARAP10276 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.1■□□□□ 0.65
RARAP10276 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RARAP10276 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
RARAP10276 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RARAP10276 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RARAP10276 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RARAP10276 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RARAP10276 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RARAP10276 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RARAP10276 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RARAP10276 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RARAP10276 SEC1P-202ENST00000473944 940 ntBASIC19.1■□□□□ 0.65
RARAP10276 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.1■□□□□ 0.65
RARAP10276 AL512604.3-201ENST00000569583 964 ntBASIC19.1■□□□□ 0.65
RARAP10276 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.1■□□□□ 0.65
RARAP10276 AC024243.1-201ENST00000609234 778 ntBASIC19.1■□□□□ 0.65
RARAP10276 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.1■□□□□ 0.65
RARAP10276 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RARAP10276 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RARAP10276 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.1■□□□□ 0.65
RARAP10276 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RARAP10276 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.1■□□□□ 0.65
RARAP10276 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RARAP10276 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RARAP10276 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RARAP10276 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.1■□□□□ 0.65
RARAP10276 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RARAP10276 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RARAP10276 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RARAP10276 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RARAP10276 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RARAP10276 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RARAP10276 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RARAP10276 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RARAP10276 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
RARAP10276 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RARAP10276 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.09■□□□□ 0.65
RARAP10276 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RARAP10276 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.09■□□□□ 0.65
RARAP10276 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.09■□□□□ 0.65
RARAP10276 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.09■□□□□ 0.65
RARAP10276 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.09■□□□□ 0.65
RARAP10276 AC010240.3-201ENST00000607688 395 ntBASIC19.09■□□□□ 0.65
RARAP10276 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
RARAP10276 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RARAP10276 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.09■□□□□ 0.65
RARAP10276 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RARAP10276 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
RARAP10276 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
RARAP10276 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RARAP10276 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.09■□□□□ 0.65
RARAP10276 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.09■□□□□ 0.65
RARAP10276 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
RARAP10276 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RARAP10276 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RARAP10276 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RARAP10276 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.08■□□□□ 0.65
RARAP10276 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.08■□□□□ 0.65
RARAP10276 AC099398.1-201ENST00000567919 2776 ntBASIC19.08■□□□□ 0.65
RARAP10276 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RARAP10276 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
RARAP10276 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RARAP10276 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RARAP10276 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RARAP10276 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.08■□□□□ 0.64
RARAP10276 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
RARAP10276 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.08■□□□□ 0.64
RARAP10276 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.08■□□□□ 0.64
RARAP10276 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
RARAP10276 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RARAP10276 ECEL1P3-201ENST00000427961 737 ntBASIC19.08■□□□□ 0.64
RARAP10276 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.08■□□□□ 0.64
RARAP10276 MIR3180-4-201ENST00000582223 153 ntBASIC19.08■□□□□ 0.64
RARAP10276 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RARAP10276 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.08■□□□□ 0.64
RARAP10276 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RARAP10276 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
RARAP10276 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RARAP10276 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RARAP10276 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RARAP10276 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
RARAP10276 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
RARAP10276 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RARAP10276 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
RARAP10276 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
RARAP10276 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RARAP10276 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RARAP10276 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RARAP10276 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RARAP10276 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms