Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SP9P0CG40 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SP9P0CG40 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SP9P0CG40 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
SP9P0CG40 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
SP9P0CG40 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
SP9P0CG40 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SP9P0CG40 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SP9P0CG40 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SP9P0CG40 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SP9P0CG40 ELK2BP-201ENST00000415014 1224 ntBASIC17.82■□□□□ 0.44
SP9P0CG40 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SP9P0CG40 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.82■□□□□ 0.44
SP9P0CG40 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
SP9P0CG40 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.82■□□□□ 0.44
SP9P0CG40 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SP9P0CG40 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.82■□□□□ 0.44
SP9P0CG40 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.82■□□□□ 0.44
SP9P0CG40 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.82■□□□□ 0.44
SP9P0CG40 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.82■□□□□ 0.44
SP9P0CG40 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
SP9P0CG40 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.82■□□□□ 0.44
SP9P0CG40 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SP9P0CG40 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SP9P0CG40 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SP9P0CG40 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.82■□□□□ 0.44
SP9P0CG40 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SP9P0CG40 AC112907.3-201ENST00000577781 2400 ntBASIC17.82■□□□□ 0.44
SP9P0CG40 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SP9P0CG40 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SP9P0CG40 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SP9P0CG40 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.82■□□□□ 0.44
SP9P0CG40 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SP9P0CG40 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.81■□□□□ 0.44
SP9P0CG40 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SP9P0CG40 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SP9P0CG40 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SP9P0CG40 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.81■□□□□ 0.44
SP9P0CG40 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SP9P0CG40 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SP9P0CG40 SPDYE21P-201ENST00000413323 827 ntBASIC17.81■□□□□ 0.44
SP9P0CG40 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SP9P0CG40 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SP9P0CG40 PDPK2P-202ENST00000562415 1191 ntBASIC17.81■□□□□ 0.44
SP9P0CG40 AD001527.2-201ENST00000622994 785 ntBASIC17.81■□□□□ 0.44
SP9P0CG40 AC004790.2-201ENST00000623588 572 ntBASIC17.81■□□□□ 0.44
SP9P0CG40 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.81■□□□□ 0.44
SP9P0CG40 AL035252.4-201ENST00000624174 288 ntBASIC17.81■□□□□ 0.44
SP9P0CG40 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.81■□□□□ 0.44
SP9P0CG40 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SP9P0CG40 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.81■□□□□ 0.44
SP9P0CG40 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SP9P0CG40 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SP9P0CG40 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SP9P0CG40 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.81■□□□□ 0.44
SP9P0CG40 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SP9P0CG40 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.81■□□□□ 0.44
SP9P0CG40 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SP9P0CG40 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SP9P0CG40 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SP9P0CG40 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SP9P0CG40 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SP9P0CG40 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SP9P0CG40 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SP9P0CG40 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SP9P0CG40 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SP9P0CG40 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.8■□□□□ 0.44
SP9P0CG40 ACTG1P14-201ENST00000446382 1122 ntBASIC17.8■□□□□ 0.44
SP9P0CG40 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.8■□□□□ 0.44
SP9P0CG40 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SP9P0CG40 IGHV3-65-201ENST00000523210 341 ntBASIC17.8■□□□□ 0.44
SP9P0CG40 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.8■□□□□ 0.44
SP9P0CG40 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.8■□□□□ 0.44
SP9P0CG40 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.8■□□□□ 0.44
SP9P0CG40 AC005498.2-205ENST00000593218 784 ntBASIC17.8■□□□□ 0.44
SP9P0CG40 AC004835.2-201ENST00000603762 682 ntBASIC17.8■□□□□ 0.44
SP9P0CG40 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.8■□□□□ 0.44
SP9P0CG40 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SP9P0CG40 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.8■□□□□ 0.44
SP9P0CG40 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SP9P0CG40 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.8■□□□□ 0.44
SP9P0CG40 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SP9P0CG40 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.8■□□□□ 0.44
SP9P0CG40 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SP9P0CG40 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SP9P0CG40 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SP9P0CG40 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SP9P0CG40 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SP9P0CG40 KRT8P47-201ENST00000604727 1398 ntBASIC17.79■□□□□ 0.44
SP9P0CG40 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.79■□□□□ 0.44
SP9P0CG40 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SP9P0CG40 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SP9P0CG40 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SP9P0CG40 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SP9P0CG40 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SP9P0CG40 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
SP9P0CG40 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.79■□□□□ 0.44
SP9P0CG40 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.79■□□□□ 0.44
SP9P0CG40 AC005034.1-201ENST00000426657 489 ntBASIC17.79■□□□□ 0.44
SP9P0CG40 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms