Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 TMEM191A-211ENST00000637163 1067 ntBASIC19.69■□□□□ 0.74
CCDC172P0C7W6 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC172P0C7W6 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC172P0C7W6 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC172P0C7W6 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC172P0C7W6 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC172P0C7W6 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC172P0C7W6 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC172P0C7W6 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC172P0C7W6 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC172P0C7W6 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC172P0C7W6 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC172P0C7W6 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC172P0C7W6 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC172P0C7W6 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC172P0C7W6 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC172P0C7W6 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC172P0C7W6 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC172P0C7W6 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC172P0C7W6 AL096828.2-201ENST00000567259 1965 ntBASIC19.68■□□□□ 0.74
CCDC172P0C7W6 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CCDC172P0C7W6 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC172P0C7W6 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC172P0C7W6 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC172P0C7W6 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC172P0C7W6 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC172P0C7W6 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC172P0C7W6 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CCDC172P0C7W6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC172P0C7W6 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.68■□□□□ 0.74
CCDC172P0C7W6 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.68■□□□□ 0.74
CCDC172P0C7W6 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC172P0C7W6 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.68■□□□□ 0.74
CCDC172P0C7W6 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC172P0C7W6 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC172P0C7W6 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.68■□□□□ 0.74
CCDC172P0C7W6 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC172P0C7W6 AP000525.1-201ENST00000608286 694 ntBASIC19.68■□□□□ 0.74
CCDC172P0C7W6 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC172P0C7W6 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC172P0C7W6 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC172P0C7W6 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC172P0C7W6 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC172P0C7W6 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC172P0C7W6 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC172P0C7W6 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC172P0C7W6 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC172P0C7W6 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC172P0C7W6 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC172P0C7W6 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC172P0C7W6 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC172P0C7W6 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC172P0C7W6 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC172P0C7W6 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC172P0C7W6 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC172P0C7W6 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC172P0C7W6 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC172P0C7W6 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC172P0C7W6 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC172P0C7W6 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.67■□□□□ 0.74
CCDC172P0C7W6 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC172P0C7W6 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
CCDC172P0C7W6 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.67■□□□□ 0.74
CCDC172P0C7W6 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.67■□□□□ 0.74
CCDC172P0C7W6 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC172P0C7W6 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.67■□□□□ 0.74
CCDC172P0C7W6 AC112497.1-201ENST00000624824 639 ntBASIC19.67■□□□□ 0.74
CCDC172P0C7W6 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC172P0C7W6 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC172P0C7W6 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC172P0C7W6 PHGDH-209ENST00000641074 1780 ntBASIC19.67■□□□□ 0.74
CCDC172P0C7W6 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC172P0C7W6 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CCDC172P0C7W6 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC172P0C7W6 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CCDC172P0C7W6 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC172P0C7W6 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC172P0C7W6 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC172P0C7W6 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC172P0C7W6 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CCDC172P0C7W6 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC172P0C7W6 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC172P0C7W6 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CCDC172P0C7W6 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC172P0C7W6 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC172P0C7W6 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CCDC172P0C7W6 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.66■□□□□ 0.74
CCDC172P0C7W6 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC172P0C7W6 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC172P0C7W6 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC172P0C7W6 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC172P0C7W6 MIR1238-201ENST00000408483 83 ntBASIC19.66■□□□□ 0.74
CCDC172P0C7W6 AC007663.1-201ENST00000438948 1240 ntBASIC19.66■□□□□ 0.74
CCDC172P0C7W6 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.66■□□□□ 0.74
CCDC172P0C7W6 AC128688.1-201ENST00000487626 519 ntBASIC19.66■□□□□ 0.74
CCDC172P0C7W6 AC104390.1-201ENST00000555663 520 ntBASIC19.66■□□□□ 0.74
CCDC172P0C7W6 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC172P0C7W6 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC172P0C7W6 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC172P0C7W6 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms