Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FREM3P0C091 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FREM3P0C091 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.51■□□□□ 0.23
FREM3P0C091 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
FREM3P0C091 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FREM3P0C091 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FREM3P0C091 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FREM3P0C091 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FREM3P0C091 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FREM3P0C091 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
FREM3P0C091 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.51■□□□□ 0.23
FREM3P0C091 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.51■□□□□ 0.23
FREM3P0C091 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.51■□□□□ 0.23
FREM3P0C091 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.51■□□□□ 0.23
FREM3P0C091 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.51■□□□□ 0.23
FREM3P0C091 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FREM3P0C091 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FREM3P0C091 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FREM3P0C091 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FREM3P0C091 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.51■□□□□ 0.23
FREM3P0C091 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FREM3P0C091 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
FREM3P0C091 IGHGP-201ENST00000390555 1178 ntBASIC16.51■□□□□ 0.23
FREM3P0C091 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
FREM3P0C091 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.51■□□□□ 0.23
FREM3P0C091 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
FREM3P0C091 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
FREM3P0C091 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
FREM3P0C091 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FREM3P0C091 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FREM3P0C091 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FREM3P0C091 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
FREM3P0C091 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.5■□□□□ 0.23
FREM3P0C091 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FREM3P0C091 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FREM3P0C091 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.5■□□□□ 0.23
FREM3P0C091 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FREM3P0C091 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
FREM3P0C091 AC005332.8-201ENST00000622750 2735 ntBASIC16.5■□□□□ 0.23
FREM3P0C091 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.5■□□□□ 0.23
FREM3P0C091 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FREM3P0C091 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.5■□□□□ 0.23
FREM3P0C091 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FREM3P0C091 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.5■□□□□ 0.23
FREM3P0C091 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
FREM3P0C091 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
FREM3P0C091 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FREM3P0C091 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
FREM3P0C091 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
FREM3P0C091 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.5■□□□□ 0.23
FREM3P0C091 TOB2P1-201ENST00000469761 992 ntBASIC16.5■□□□□ 0.23
FREM3P0C091 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.5■□□□□ 0.23
FREM3P0C091 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FREM3P0C091 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.5■□□□□ 0.23
FREM3P0C091 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.5■□□□□ 0.23
FREM3P0C091 AC124864.1-201ENST00000623408 392 ntBASIC16.5■□□□□ 0.23
FREM3P0C091 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FREM3P0C091 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FREM3P0C091 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
FREM3P0C091 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
FREM3P0C091 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
FREM3P0C091 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.5■□□□□ 0.23
FREM3P0C091 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FREM3P0C091 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FREM3P0C091 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FREM3P0C091 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.5■□□□□ 0.23
FREM3P0C091 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FREM3P0C091 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FREM3P0C091 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.49■□□□□ 0.23
FREM3P0C091 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FREM3P0C091 MIR149-201ENST00000384879 89 ntBASIC16.49■□□□□ 0.23
FREM3P0C091 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
FREM3P0C091 AC111152.3-201ENST00000569699 673 ntBASIC16.49■□□□□ 0.23
FREM3P0C091 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
FREM3P0C091 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FREM3P0C091 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.49■□□□□ 0.23
FREM3P0C091 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.49■□□□□ 0.23
FREM3P0C091 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
FREM3P0C091 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FREM3P0C091 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
FREM3P0C091 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.49■□□□□ 0.23
FREM3P0C091 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FREM3P0C091 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FREM3P0C091 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FREM3P0C091 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FREM3P0C091 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
FREM3P0C091 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FREM3P0C091 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FREM3P0C091 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
FREM3P0C091 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.49■□□□□ 0.23
FREM3P0C091 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FREM3P0C091 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.49■□□□□ 0.23
FREM3P0C091 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.49■□□□□ 0.23
FREM3P0C091 AC092329.2-201ENST00000598402 547 ntBASIC16.49■□□□□ 0.23
FREM3P0C091 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.49■□□□□ 0.23
FREM3P0C091 AL592071.1-201ENST00000611956 408 ntBASIC16.49■□□□□ 0.23
FREM3P0C091 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.49■□□□□ 0.23
FREM3P0C091 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FREM3P0C091 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FREM3P0C091 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms