Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CSF1P09603 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CSF1P09603 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CSF1P09603 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CSF1P09603 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.75■□□□□ 0.11
CSF1P09603 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CSF1P09603 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CSF1P09603 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.75■□□□□ 0.11
CSF1P09603 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CSF1P09603 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC15.75■□□□□ 0.11
CSF1P09603 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CSF1P09603 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CSF1P09603 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CSF1P09603 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC15.75■□□□□ 0.11
CSF1P09603 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CSF1P09603 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CSF1P09603 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CSF1P09603 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.75■□□□□ 0.11
CSF1P09603 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CSF1P09603 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CSF1P09603 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CSF1P09603 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CSF1P09603 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC15.75■□□□□ 0.11
CSF1P09603 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CSF1P09603 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CSF1P09603 AC133681.1-201ENST00000465482 601 ntBASIC15.75■□□□□ 0.11
CSF1P09603 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC15.75■□□□□ 0.11
CSF1P09603 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CSF1P09603 TK2-204ENST00000525974 1178 ntTSL 2 BASIC15.75■□□□□ 0.11
CSF1P09603 AL160286.2-201ENST00000567150 934 ntBASIC15.75■□□□□ 0.11
CSF1P09603 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.75■□□□□ 0.11
CSF1P09603 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC15.75■□□□□ 0.11
CSF1P09603 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CSF1P09603 AC120498.8-201ENST00000614275 531 ntBASIC15.75■□□□□ 0.11
CSF1P09603 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
CSF1P09603 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.75■□□□□ 0.11
CSF1P09603 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.75■□□□□ 0.11
CSF1P09603 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CSF1P09603 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CSF1P09603 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CSF1P09603 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC15.75■□□□□ 0.11
CSF1P09603 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.75■□□□□ 0.11
CSF1P09603 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CSF1P09603 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CSF1P09603 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CSF1P09603 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CSF1P09603 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.75■□□□□ 0.11
CSF1P09603 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CSF1P09603 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CSF1P09603 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CSF1P09603 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSF1P09603 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CSF1P09603 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSF1P09603 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.74■□□□□ 0.11
CSF1P09603 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSF1P09603 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSF1P09603 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CSF1P09603 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSF1P09603 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSF1P09603 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.74■□□□□ 0.11
CSF1P09603 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CSF1P09603 KRT8P32-201ENST00000512863 1461 ntBASIC15.74■□□□□ 0.11
CSF1P09603 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSF1P09603 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.74■□□□□ 0.11
CSF1P09603 KRASP1-201ENST00000407852 552 ntBASIC15.74■□□□□ 0.11
CSF1P09603 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CSF1P09603 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.74■□□□□ 0.11
CSF1P09603 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC15.74■□□□□ 0.11
CSF1P09603 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC15.74■□□□□ 0.11
CSF1P09603 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC15.74■□□□□ 0.11
CSF1P09603 REXO2-216ENST00000544196 452 ntTSL 3 BASIC15.74■□□□□ 0.11
CSF1P09603 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC15.74■□□□□ 0.11
CSF1P09603 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSF1P09603 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSF1P09603 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSF1P09603 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.74■□□□□ 0.11
CSF1P09603 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSF1P09603 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC15.74■□□□□ 0.11
CSF1P09603 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSF1P09603 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CSF1P09603 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CSF1P09603 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CSF1P09603 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CSF1P09603 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSF1P09603 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC15.74■□□□□ 0.11
CSF1P09603 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSF1P09603 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CSF1P09603 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CSF1P09603 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSF1P09603 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSF1P09603 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSF1P09603 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSF1P09603 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSF1P09603 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
CSF1P09603 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.74■□□□□ 0.11
CSF1P09603 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.74■□□□□ 0.11
CSF1P09603 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSF1P09603 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.74■□□□□ 0.11
CSF1P09603 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CSF1P09603 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms