Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CYP3A4P08684 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CYP3A4P08684 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.41■□□□□ 0.86
CYP3A4P08684 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.41■□□□□ 0.86
CYP3A4P08684 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.41■□□□□ 0.86
CYP3A4P08684 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.41■□□□□ 0.86
CYP3A4P08684 AC005336.2-201ENST00000593183 939 ntBASIC20.41■□□□□ 0.86
CYP3A4P08684 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.41■□□□□ 0.86
CYP3A4P08684 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CYP3A4P08684 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CYP3A4P08684 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.41■□□□□ 0.86
CYP3A4P08684 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.41■□□□□ 0.86
CYP3A4P08684 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CYP3A4P08684 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
CYP3A4P08684 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CYP3A4P08684 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CYP3A4P08684 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CYP3A4P08684 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CYP3A4P08684 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.4■□□□□ 0.86
CYP3A4P08684 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CYP3A4P08684 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CYP3A4P08684 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CYP3A4P08684 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
CYP3A4P08684 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CYP3A4P08684 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CYP3A4P08684 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CYP3A4P08684 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CYP3A4P08684 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.4■□□□□ 0.86
CYP3A4P08684 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CYP3A4P08684 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
CYP3A4P08684 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CYP3A4P08684 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CYP3A4P08684 DUSP5P1-201ENST00000441325 1139 ntBASIC20.4■□□□□ 0.86
CYP3A4P08684 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
CYP3A4P08684 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CYP3A4P08684 AC074051.2-201ENST00000565115 352 ntBASIC20.4■□□□□ 0.86
CYP3A4P08684 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.4■□□□□ 0.86
CYP3A4P08684 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CYP3A4P08684 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.4■□□□□ 0.86
CYP3A4P08684 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CYP3A4P08684 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CYP3A4P08684 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.4■□□□□ 0.86
CYP3A4P08684 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CYP3A4P08684 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CYP3A4P08684 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CYP3A4P08684 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CYP3A4P08684 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CYP3A4P08684 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CYP3A4P08684 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CYP3A4P08684 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.39■□□□□ 0.86
CYP3A4P08684 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CYP3A4P08684 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CYP3A4P08684 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CYP3A4P08684 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CYP3A4P08684 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CYP3A4P08684 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.39■□□□□ 0.85
CYP3A4P08684 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CYP3A4P08684 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CYP3A4P08684 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CYP3A4P08684 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.39■□□□□ 0.85
CYP3A4P08684 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.39■□□□□ 0.85
CYP3A4P08684 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.39■□□□□ 0.85
CYP3A4P08684 AC104819.1-201ENST00000504587 486 ntBASIC20.39■□□□□ 0.85
CYP3A4P08684 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.39■□□□□ 0.85
CYP3A4P08684 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CYP3A4P08684 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CYP3A4P08684 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.39■□□□□ 0.85
CYP3A4P08684 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CYP3A4P08684 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CYP3A4P08684 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CYP3A4P08684 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.85
CYP3A4P08684 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CYP3A4P08684 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CYP3A4P08684 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CYP3A4P08684 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.38■□□□□ 0.85
CYP3A4P08684 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CYP3A4P08684 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CYP3A4P08684 NSUN5P1-202ENST00000421140 1535 ntBASIC20.38■□□□□ 0.85
CYP3A4P08684 NSUN5P2-203ENST00000457352 1529 ntBASIC20.38■□□□□ 0.85
CYP3A4P08684 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CYP3A4P08684 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.38■□□□□ 0.85
CYP3A4P08684 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CYP3A4P08684 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CYP3A4P08684 AC022898.2-201ENST00000616822 1312 ntBASIC20.38■□□□□ 0.85
CYP3A4P08684 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CYP3A4P08684 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CYP3A4P08684 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CYP3A4P08684 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CYP3A4P08684 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CYP3A4P08684 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CYP3A4P08684 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
CYP3A4P08684 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.38■□□□□ 0.85
CYP3A4P08684 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
CYP3A4P08684 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.38■□□□□ 0.85
CYP3A4P08684 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.38■□□□□ 0.85
CYP3A4P08684 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.38■□□□□ 0.85
CYP3A4P08684 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.38■□□□□ 0.85
CYP3A4P08684 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CYP3A4P08684 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CYP3A4P08684 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms