Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
MT-ND1P03886 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
MT-ND1P03886 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND1P03886 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
MT-ND1P03886 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND1P03886 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND1P03886 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND1P03886 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
MT-ND1P03886 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND1P03886 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND1P03886 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND1P03886 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND1P03886 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND1P03886 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.18■□□□□ 0.34
MT-ND1P03886 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND1P03886 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND1P03886 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND1P03886 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND1P03886 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.18■□□□□ 0.34
MT-ND1P03886 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.18■□□□□ 0.34
MT-ND1P03886 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND1P03886 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND1P03886 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND1P03886 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND1P03886 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.18■□□□□ 0.34
MT-ND1P03886 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND1P03886 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND1P03886 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.18■□□□□ 0.34
MT-ND1P03886 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND1P03886 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
MT-ND1P03886 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND1P03886 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND1P03886 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND1P03886 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND1P03886 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.18■□□□□ 0.34
MT-ND1P03886 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND1P03886 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
MT-ND1P03886 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
MT-ND1P03886 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND1P03886 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.18■□□□□ 0.34
MT-ND1P03886 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND1P03886 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND1P03886 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND1P03886 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.17■□□□□ 0.34
MT-ND1P03886 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND1P03886 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND1P03886 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND1P03886 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND1P03886 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND1P03886 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND1P03886 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.17■□□□□ 0.34
MT-ND1P03886 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND1P03886 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND1P03886 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.17■□□□□ 0.34
MT-ND1P03886 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.17■□□□□ 0.34
MT-ND1P03886 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND1P03886 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND1P03886 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND1P03886 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND1P03886 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.17■□□□□ 0.34
MT-ND1P03886 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
MT-ND1P03886 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.17■□□□□ 0.34
MT-ND1P03886 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.17■□□□□ 0.34
MT-ND1P03886 PRSS44-201ENST00000515154 1146 ntBASIC17.17■□□□□ 0.34
MT-ND1P03886 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND1P03886 AL353708.3-201ENST00000610272 989 ntBASIC17.17■□□□□ 0.34
MT-ND1P03886 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
MT-ND1P03886 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
MT-ND1P03886 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND1P03886 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.17■□□□□ 0.34
MT-ND1P03886 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND1P03886 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.17■□□□□ 0.34
MT-ND1P03886 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.17■□□□□ 0.34
MT-ND1P03886 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND1P03886 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND1P03886 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND1P03886 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.17■□□□□ 0.34
MT-ND1P03886 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
MT-ND1P03886 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND1P03886 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND1P03886 AC008894.3-201ENST00000624324 3103 ntBASIC17.16■□□□□ 0.34
MT-ND1P03886 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
MT-ND1P03886 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.16■□□□□ 0.34
MT-ND1P03886 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-ND1P03886 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.16■□□□□ 0.34
MT-ND1P03886 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-ND1P03886 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-ND1P03886 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-ND1P03886 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MT-ND1P03886 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
MT-ND1P03886 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-ND1P03886 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MT-ND1P03886 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-ND1P03886 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MT-ND1P03886 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.16■□□□□ 0.34
MT-ND1P03886 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-ND1P03886 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MT-ND1P03886 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.16■□□□□ 0.34
MT-ND1P03886 AC004980.1-204ENST00000429707 299 ntBASIC17.16■□□□□ 0.34
MT-ND1P03886 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms