Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNA1P02708 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNA1P02708 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.74■□□□□ 0.75
CHRNA1P02708 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CHRNA1P02708 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.73■□□□□ 0.75
CHRNA1P02708 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNA1P02708 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.73■□□□□ 0.75
CHRNA1P02708 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CHRNA1P02708 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNA1P02708 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNA1P02708 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNA1P02708 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNA1P02708 KRT18P58-201ENST00000527480 1120 ntBASIC19.73■□□□□ 0.75
CHRNA1P02708 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.73■□□□□ 0.75
CHRNA1P02708 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNA1P02708 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.73■□□□□ 0.75
CHRNA1P02708 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNA1P02708 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNA1P02708 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CHRNA1P02708 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNA1P02708 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CHRNA1P02708 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CHRNA1P02708 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNA1P02708 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.72■□□□□ 0.75
CHRNA1P02708 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNA1P02708 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNA1P02708 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNA1P02708 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNA1P02708 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNA1P02708 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNA1P02708 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.72■□□□□ 0.75
CHRNA1P02708 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.72■□□□□ 0.75
CHRNA1P02708 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNA1P02708 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.72■□□□□ 0.75
CHRNA1P02708 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.72■□□□□ 0.75
CHRNA1P02708 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNA1P02708 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.72■□□□□ 0.75
CHRNA1P02708 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNA1P02708 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.72■□□□□ 0.75
CHRNA1P02708 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CHRNA1P02708 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.72■□□□□ 0.75
CHRNA1P02708 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.72■□□□□ 0.75
CHRNA1P02708 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNA1P02708 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNA1P02708 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHRNA1P02708 AC132938.6-201ENST00000623828 1655 ntBASIC19.71■□□□□ 0.75
CHRNA1P02708 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHRNA1P02708 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHRNA1P02708 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.71■□□□□ 0.75
CHRNA1P02708 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHRNA1P02708 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.71■□□□□ 0.75
CHRNA1P02708 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHRNA1P02708 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.71■□□□□ 0.75
CHRNA1P02708 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.71■□□□□ 0.75
CHRNA1P02708 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.71■□□□□ 0.75
CHRNA1P02708 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHRNA1P02708 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.71■□□□□ 0.75
CHRNA1P02708 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CHRNA1P02708 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHRNA1P02708 POLD2P1-201ENST00000511220 997 ntBASIC19.71■□□□□ 0.75
CHRNA1P02708 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.71■□□□□ 0.75
CHRNA1P02708 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.71■□□□□ 0.75
CHRNA1P02708 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHRNA1P02708 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.71■□□□□ 0.75
CHRNA1P02708 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CHRNA1P02708 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHRNA1P02708 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHRNA1P02708 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CHRNA1P02708 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.7■□□□□ 0.74
CHRNA1P02708 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNA1P02708 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CHRNA1P02708 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNA1P02708 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNA1P02708 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNA1P02708 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNA1P02708 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
CHRNA1P02708 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNA1P02708 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CHRNA1P02708 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.7■□□□□ 0.74
CHRNA1P02708 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.7■□□□□ 0.74
CHRNA1P02708 RPS2P1-201ENST00000434010 821 ntBASIC19.7■□□□□ 0.74
CHRNA1P02708 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.7■□□□□ 0.74
CHRNA1P02708 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNA1P02708 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.7■□□□□ 0.74
CHRNA1P02708 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.7■□□□□ 0.74
CHRNA1P02708 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
CHRNA1P02708 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.7■□□□□ 0.74
CHRNA1P02708 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHRNA1P02708 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
CHRNA1P02708 GMCL1P1-201ENST00000463439 1581 ntBASIC19.7■□□□□ 0.74
CHRNA1P02708 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNA1P02708 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.69■□□□□ 0.74
CHRNA1P02708 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNA1P02708 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNA1P02708 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CHRNA1P02708 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.69■□□□□ 0.74
CHRNA1P02708 RPS2P28-201ENST00000314255 741 ntBASIC19.69■□□□□ 0.74
CHRNA1P02708 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHRNA1P02708 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.69■□□□□ 0.74
CHRNA1P02708 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms