Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IFNA1P01562 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
IFNA1P01562 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
IFNA1P01562 SERP1-205ENST00000487153 657 ntTSL 4 BASIC14.42□□□□□ -0.1
IFNA1P01562 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
IFNA1P01562 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
IFNA1P01562 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IFNA1P01562 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
IFNA1P01562 AC124283.5-201ENST00000624661 1809 ntBASIC14.42□□□□□ -0.1
IFNA1P01562 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IFNA1P01562 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14.42□□□□□ -0.1
IFNA1P01562 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
IFNA1P01562 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC14.42□□□□□ -0.1
IFNA1P01562 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC14.42□□□□□ -0.1
IFNA1P01562 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
IFNA1P01562 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
IFNA1P01562 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
IFNA1P01562 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
IFNA1P01562 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IFNA1P01562 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.42□□□□□ -0.1
IFNA1P01562 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.42□□□□□ -0.1
IFNA1P01562 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IFNA1P01562 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
IFNA1P01562 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
IFNA1P01562 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
IFNA1P01562 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IFNA1P01562 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
IFNA1P01562 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
IFNA1P01562 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
IFNA1P01562 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IFNA1P01562 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC14.41□□□□□ -0.1
IFNA1P01562 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
IFNA1P01562 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
IFNA1P01562 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IFNA1P01562 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
IFNA1P01562 UQCRFS1P1-201ENST00000435169 820 ntBASIC14.41□□□□□ -0.1
IFNA1P01562 TUBB8P6-201ENST00000436895 1288 ntBASIC14.41□□□□□ -0.1
IFNA1P01562 TSPY23P-201ENST00000440136 739 ntBASIC14.41□□□□□ -0.1
IFNA1P01562 AC123595.1-201ENST00000440769 1046 ntBASIC14.41□□□□□ -0.1
IFNA1P01562 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC14.41□□□□□ -0.1
IFNA1P01562 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC14.41□□□□□ -0.1
IFNA1P01562 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC14.41□□□□□ -0.1
IFNA1P01562 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
IFNA1P01562 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC14.41□□□□□ -0.1
IFNA1P01562 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC14.41□□□□□ -0.1
IFNA1P01562 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IFNA1P01562 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IFNA1P01562 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.41□□□□□ -0.1
IFNA1P01562 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IFNA1P01562 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
IFNA1P01562 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IFNA1P01562 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IFNA1P01562 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IFNA1P01562 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IFNA1P01562 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
IFNA1P01562 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IFNA1P01562 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC14.41□□□□□ -0.1
IFNA1P01562 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
IFNA1P01562 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IFNA1P01562 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IFNA1P01562 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
IFNA1P01562 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
IFNA1P01562 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
IFNA1P01562 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
IFNA1P01562 AL096828.2-201ENST00000567259 1965 ntBASIC14.4□□□□□ -0.1
IFNA1P01562 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
IFNA1P01562 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
IFNA1P01562 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
IFNA1P01562 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
IFNA1P01562 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.4□□□□□ -0.1
IFNA1P01562 AL355472.2-201ENST00000422958 438 ntBASIC14.4□□□□□ -0.1
IFNA1P01562 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC14.4□□□□□ -0.1
IFNA1P01562 AC069236.1-201ENST00000604339 616 ntBASIC14.4□□□□□ -0.1
IFNA1P01562 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC14.4□□□□□ -0.1
IFNA1P01562 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
IFNA1P01562 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
IFNA1P01562 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
IFNA1P01562 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC14.4□□□□□ -0.1
IFNA1P01562 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC14.4□□□□□ -0.1
IFNA1P01562 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
IFNA1P01562 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
IFNA1P01562 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
IFNA1P01562 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC14.4□□□□□ -0.1
IFNA1P01562 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
IFNA1P01562 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
IFNA1P01562 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
IFNA1P01562 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
IFNA1P01562 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
IFNA1P01562 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.4□□□□□ -0.1
IFNA1P01562 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
IFNA1P01562 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
IFNA1P01562 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.4□□□□□ -0.1
IFNA1P01562 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
IFNA1P01562 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
IFNA1P01562 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IFNA1P01562 AC011270.2-201ENST00000624293 2550 ntBASIC14.39□□□□□ -0.11
IFNA1P01562 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IFNA1P01562 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
IFNA1P01562 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC14.39□□□□□ -0.11
IFNA1P01562 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms