Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CNOT4O95628 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
CNOT4O95628 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CNOT4O95628 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CNOT4O95628 AL162741.1-201ENST00000565563 1558 ntBASIC16.17■□□□□ 0.18
CNOT4O95628 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNOT4O95628 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNOT4O95628 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNOT4O95628 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.17■□□□□ 0.18
CNOT4O95628 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNOT4O95628 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNOT4O95628 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNOT4O95628 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNOT4O95628 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNOT4O95628 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNOT4O95628 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CNOT4O95628 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNOT4O95628 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.17■□□□□ 0.18
CNOT4O95628 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.17■□□□□ 0.18
CNOT4O95628 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CNOT4O95628 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNOT4O95628 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNOT4O95628 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.17■□□□□ 0.18
CNOT4O95628 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.17■□□□□ 0.18
CNOT4O95628 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNOT4O95628 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNOT4O95628 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CNOT4O95628 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
CNOT4O95628 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.17■□□□□ 0.18
CNOT4O95628 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CNOT4O95628 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.17■□□□□ 0.18
CNOT4O95628 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
CNOT4O95628 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.17■□□□□ 0.18
CNOT4O95628 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.17■□□□□ 0.18
CNOT4O95628 AC024563.2-201ENST00000603282 481 ntBASIC16.17■□□□□ 0.18
CNOT4O95628 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CNOT4O95628 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CNOT4O95628 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.17■□□□□ 0.18
CNOT4O95628 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
CNOT4O95628 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
CNOT4O95628 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CNOT4O95628 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.17■□□□□ 0.18
CNOT4O95628 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNOT4O95628 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
CNOT4O95628 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CNOT4O95628 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.17■□□□□ 0.18
CNOT4O95628 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNOT4O95628 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CNOT4O95628 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CNOT4O95628 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNOT4O95628 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CNOT4O95628 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNOT4O95628 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNOT4O95628 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNOT4O95628 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNOT4O95628 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNOT4O95628 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNOT4O95628 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.16■□□□□ 0.18
CNOT4O95628 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.16■□□□□ 0.18
CNOT4O95628 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.16■□□□□ 0.18
CNOT4O95628 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.16■□□□□ 0.18
CNOT4O95628 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNOT4O95628 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.16■□□□□ 0.18
CNOT4O95628 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.16■□□□□ 0.18
CNOT4O95628 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.16■□□□□ 0.18
CNOT4O95628 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.16■□□□□ 0.18
CNOT4O95628 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.16■□□□□ 0.18
CNOT4O95628 AC011498.5-201ENST00000592027 486 ntBASIC16.16■□□□□ 0.18
CNOT4O95628 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.16■□□□□ 0.18
CNOT4O95628 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNOT4O95628 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNOT4O95628 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNOT4O95628 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CNOT4O95628 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNOT4O95628 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNOT4O95628 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CNOT4O95628 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNOT4O95628 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CNOT4O95628 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CNOT4O95628 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNOT4O95628 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
CNOT4O95628 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.16■□□□□ 0.18
CNOT4O95628 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNOT4O95628 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNOT4O95628 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.16■□□□□ 0.18
CNOT4O95628 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.16■□□□□ 0.18
CNOT4O95628 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNOT4O95628 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CNOT4O95628 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNOT4O95628 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.15■□□□□ 0.18
CNOT4O95628 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CNOT4O95628 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CNOT4O95628 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CNOT4O95628 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CNOT4O95628 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.15■□□□□ 0.18
CNOT4O95628 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNOT4O95628 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.15■□□□□ 0.18
CNOT4O95628 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.15■□□□□ 0.18
CNOT4O95628 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.15■□□□□ 0.18
CNOT4O95628 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms