Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TRIM3O75382 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.99■□□□□ 0.31
TRIM3O75382 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM3O75382 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM3O75382 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM3O75382 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM3O75382 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TRIM3O75382 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
TRIM3O75382 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM3O75382 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TRIM3O75382 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM3O75382 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM3O75382 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM3O75382 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM3O75382 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TRIM3O75382 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM3O75382 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
TRIM3O75382 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM3O75382 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.98■□□□□ 0.31
TRIM3O75382 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TRIM3O75382 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM3O75382 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM3O75382 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM3O75382 AL031133.1-201ENST00000406807 723 ntBASIC16.98■□□□□ 0.31
TRIM3O75382 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM3O75382 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM3O75382 KRT18P23-201ENST00000435622 1283 ntBASIC16.98■□□□□ 0.31
TRIM3O75382 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM3O75382 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.98■□□□□ 0.31
TRIM3O75382 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM3O75382 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
TRIM3O75382 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM3O75382 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM3O75382 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
TRIM3O75382 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.98■□□□□ 0.31
TRIM3O75382 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM3O75382 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM3O75382 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM3O75382 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM3O75382 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.97■□□□□ 0.31
TRIM3O75382 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.97■□□□□ 0.31
TRIM3O75382 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM3O75382 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM3O75382 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM3O75382 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
TRIM3O75382 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TRIM3O75382 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM3O75382 MTMR9LP-203ENST00000426597 1545 ntBASIC16.97■□□□□ 0.31
TRIM3O75382 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.97■□□□□ 0.31
TRIM3O75382 AC034236.2-201ENST00000606662 1610 ntBASIC16.97■□□□□ 0.31
TRIM3O75382 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM3O75382 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM3O75382 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM3O75382 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM3O75382 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM3O75382 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM3O75382 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TRIM3O75382 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM3O75382 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM3O75382 SPDYE15P-201ENST00000424157 909 ntBASIC16.97■□□□□ 0.31
TRIM3O75382 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM3O75382 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM3O75382 AC034232.1-201ENST00000506026 1064 ntBASIC16.97■□□□□ 0.31
TRIM3O75382 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.97■□□□□ 0.31
TRIM3O75382 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM3O75382 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM3O75382 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM3O75382 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM3O75382 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM3O75382 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM3O75382 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM3O75382 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM3O75382 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM3O75382 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM3O75382 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TRIM3O75382 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM3O75382 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM3O75382 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM3O75382 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM3O75382 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.96■□□□□ 0.31
TRIM3O75382 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
TRIM3O75382 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TRIM3O75382 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM3O75382 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TRIM3O75382 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM3O75382 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM3O75382 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM3O75382 AL671277.2-201ENST00000458060 996 ntBASIC16.96■□□□□ 0.31
TRIM3O75382 RASA4DP-201ENST00000460726 1199 ntBASIC16.96■□□□□ 0.31
TRIM3O75382 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.96■□□□□ 0.31
TRIM3O75382 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.96■□□□□ 0.31
TRIM3O75382 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TRIM3O75382 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM3O75382 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM3O75382 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM3O75382 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM3O75382 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM3O75382 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM3O75382 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
TRIM3O75382 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms