Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.66■□□□□ 0.42
CNOT3O75175 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
CNOT3O75175 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT3O75175 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT3O75175 FEM1AP3-201ENST00000403722 1741 ntBASIC17.66■□□□□ 0.42
CNOT3O75175 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
CNOT3O75175 AC005332.1-201ENST00000577698 1310 ntBASIC17.66■□□□□ 0.42
CNOT3O75175 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT3O75175 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT3O75175 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT3O75175 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.66■□□□□ 0.42
CNOT3O75175 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CNOT3O75175 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT3O75175 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.65■□□□□ 0.42
CNOT3O75175 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.65■□□□□ 0.42
CNOT3O75175 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
CNOT3O75175 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT3O75175 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.65■□□□□ 0.42
CNOT3O75175 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT3O75175 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT3O75175 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.65■□□□□ 0.42
CNOT3O75175 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CNOT3O75175 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.65■□□□□ 0.42
CNOT3O75175 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.65■□□□□ 0.42
CNOT3O75175 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.65■□□□□ 0.42
CNOT3O75175 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT3O75175 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT3O75175 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.65■□□□□ 0.42
CNOT3O75175 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
CNOT3O75175 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT3O75175 SPDYE13P-201ENST00000445314 798 ntBASIC17.65■□□□□ 0.42
CNOT3O75175 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT3O75175 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.65■□□□□ 0.42
CNOT3O75175 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.65■□□□□ 0.42
CNOT3O75175 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.65■□□□□ 0.42
CNOT3O75175 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.65■□□□□ 0.42
CNOT3O75175 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.65■□□□□ 0.42
CNOT3O75175 AC024243.1-201ENST00000609234 778 ntBASIC17.65■□□□□ 0.42
CNOT3O75175 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT3O75175 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.65■□□□□ 0.42
CNOT3O75175 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.65■□□□□ 0.42
CNOT3O75175 AL512353.2-201ENST00000448759 1962 ntBASIC17.65■□□□□ 0.42
CNOT3O75175 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT3O75175 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.65■□□□□ 0.42
CNOT3O75175 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.65■□□□□ 0.42
CNOT3O75175 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT3O75175 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT3O75175 AC141586.3-201ENST00000562166 1838 ntBASIC17.65■□□□□ 0.42
CNOT3O75175 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CNOT3O75175 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT3O75175 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.65■□□□□ 0.42
CNOT3O75175 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNOT3O75175 AL161938.1-201ENST00000569833 2180 ntBASIC17.64■□□□□ 0.42
CNOT3O75175 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
CNOT3O75175 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.64■□□□□ 0.42
CNOT3O75175 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.64■□□□□ 0.42
CNOT3O75175 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNOT3O75175 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNOT3O75175 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CNOT3O75175 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNOT3O75175 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CNOT3O75175 RCC2P3-201ENST00000418112 1537 ntBASIC17.64■□□□□ 0.41
CNOT3O75175 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNOT3O75175 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.64■□□□□ 0.41
CNOT3O75175 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNOT3O75175 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
CNOT3O75175 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.64■□□□□ 0.41
CNOT3O75175 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNOT3O75175 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CNOT3O75175 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CNOT3O75175 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.64■□□□□ 0.41
CNOT3O75175 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.64■□□□□ 0.41
CNOT3O75175 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNOT3O75175 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.64■□□□□ 0.41
CNOT3O75175 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.64■□□□□ 0.41
CNOT3O75175 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNOT3O75175 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
CNOT3O75175 AC090164.3-201ENST00000610780 2143 ntBASIC17.64■□□□□ 0.41
CNOT3O75175 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.64■□□□□ 0.41
CNOT3O75175 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CNOT3O75175 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CNOT3O75175 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.64■□□□□ 0.41
CNOT3O75175 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNOT3O75175 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNOT3O75175 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.64■□□□□ 0.41
CNOT3O75175 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CNOT3O75175 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CNOT3O75175 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CNOT3O75175 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CNOT3O75175 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.64■□□□□ 0.41
CNOT3O75175 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNOT3O75175 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.64■□□□□ 0.41
CNOT3O75175 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CNOT3O75175 AC006333.2-201ENST00000607957 2099 ntBASIC17.63■□□□□ 0.41
CNOT3O75175 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNOT3O75175 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CNOT3O75175 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNOT3O75175 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNOT3O75175 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CNOT3O75175 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms