Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXD2O60548 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXD2O60548 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXD2O60548 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FOXD2O60548 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXD2O60548 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.29■□□□□ 0.52
FOXD2O60548 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.29■□□□□ 0.52
FOXD2O60548 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FOXD2O60548 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXD2O60548 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXD2O60548 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
FOXD2O60548 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXD2O60548 IGHGP-201ENST00000390555 1178 ntBASIC18.29■□□□□ 0.52
FOXD2O60548 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXD2O60548 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXD2O60548 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
FOXD2O60548 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.29■□□□□ 0.52
FOXD2O60548 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.29■□□□□ 0.52
FOXD2O60548 AC009065.1-201ENST00000564055 1225 ntBASIC18.29■□□□□ 0.52
FOXD2O60548 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.29■□□□□ 0.52
FOXD2O60548 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.29■□□□□ 0.52
FOXD2O60548 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.29■□□□□ 0.52
FOXD2O60548 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
FOXD2O60548 AL139424.1-201ENST00000607572 797 ntBASIC18.29■□□□□ 0.52
FOXD2O60548 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FOXD2O60548 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXD2O60548 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
FOXD2O60548 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXD2O60548 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXD2O60548 AC104581.1-202ENST00000635932 2618 ntBASIC18.29■□□□□ 0.52
FOXD2O60548 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.29■□□□□ 0.52
FOXD2O60548 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXD2O60548 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
FOXD2O60548 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FOXD2O60548 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXD2O60548 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXD2O60548 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXD2O60548 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FOXD2O60548 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXD2O60548 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.28■□□□□ 0.52
FOXD2O60548 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.28■□□□□ 0.52
FOXD2O60548 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.28■□□□□ 0.52
FOXD2O60548 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.28■□□□□ 0.52
FOXD2O60548 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.28■□□□□ 0.52
FOXD2O60548 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXD2O60548 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXD2O60548 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
FOXD2O60548 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.28■□□□□ 0.52
FOXD2O60548 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
FOXD2O60548 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXD2O60548 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXD2O60548 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXD2O60548 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXD2O60548 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXD2O60548 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXD2O60548 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXD2O60548 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FOXD2O60548 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXD2O60548 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.28■□□□□ 0.52
FOXD2O60548 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
FOXD2O60548 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
FOXD2O60548 AP000997.3-201ENST00000623333 2250 ntBASIC18.28■□□□□ 0.52
FOXD2O60548 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
FOXD2O60548 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.27■□□□□ 0.52
FOXD2O60548 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
FOXD2O60548 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXD2O60548 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXD2O60548 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
FOXD2O60548 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXD2O60548 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
FOXD2O60548 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
FOXD2O60548 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
FOXD2O60548 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.27■□□□□ 0.52
FOXD2O60548 AC098831.1-202ENST00000438821 336 ntBASIC18.27■□□□□ 0.52
FOXD2O60548 AL591424.1-201ENST00000442569 1213 ntBASIC18.27■□□□□ 0.52
FOXD2O60548 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
FOXD2O60548 SCARNA2-201ENST00000458748 420 ntBASIC18.27■□□□□ 0.52
FOXD2O60548 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.27■□□□□ 0.52
FOXD2O60548 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXD2O60548 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXD2O60548 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXD2O60548 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
FOXD2O60548 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
FOXD2O60548 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
FOXD2O60548 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXD2O60548 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
FOXD2O60548 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
FOXD2O60548 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.27■□□□□ 0.51
FOXD2O60548 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.51
FOXD2O60548 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
FOXD2O60548 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
FOXD2O60548 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
FOXD2O60548 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.26■□□□□ 0.51
FOXD2O60548 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXD2O60548 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.26■□□□□ 0.51
FOXD2O60548 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.26■□□□□ 0.51
FOXD2O60548 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.26■□□□□ 0.51
FOXD2O60548 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXD2O60548 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXD2O60548 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms