Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SNAI2O43623 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SNAI2O43623 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNAI2O43623 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
SNAI2O43623 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
SNAI2O43623 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
SNAI2O43623 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC13.64□□□□□ -0.23
SNAI2O43623 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNAI2O43623 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SNAI2O43623 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNAI2O43623 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SNAI2O43623 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNAI2O43623 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SNAI2O43623 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNAI2O43623 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SNAI2O43623 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNAI2O43623 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SNAI2O43623 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNAI2O43623 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
SNAI2O43623 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
SNAI2O43623 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SNAI2O43623 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNAI2O43623 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNAI2O43623 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNAI2O43623 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNAI2O43623 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNAI2O43623 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNAI2O43623 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNAI2O43623 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SNAI2O43623 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNAI2O43623 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SNAI2O43623 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNAI2O43623 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNAI2O43623 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SNAI2O43623 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNAI2O43623 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC13.63□□□□□ -0.23
SNAI2O43623 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC13.63□□□□□ -0.23
SNAI2O43623 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC13.63□□□□□ -0.23
SNAI2O43623 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC13.63□□□□□ -0.23
SNAI2O43623 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SNAI2O43623 TK2-208ENST00000545043 1120 ntTSL 2 BASIC13.63□□□□□ -0.23
SNAI2O43623 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC13.63□□□□□ -0.23
SNAI2O43623 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
SNAI2O43623 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC13.63□□□□□ -0.23
SNAI2O43623 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNAI2O43623 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SNAI2O43623 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNAI2O43623 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNAI2O43623 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SNAI2O43623 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC13.63□□□□□ -0.23
SNAI2O43623 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SNAI2O43623 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.63□□□□□ -0.23
SNAI2O43623 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNAI2O43623 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNAI2O43623 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNAI2O43623 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC13.63□□□□□ -0.23
SNAI2O43623 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC13.63□□□□□ -0.23
SNAI2O43623 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNAI2O43623 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SNAI2O43623 LTF-203ENST00000426532 2494 ntTSL 2 BASIC13.63□□□□□ -0.23
SNAI2O43623 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNAI2O43623 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC13.63□□□□□ -0.23
SNAI2O43623 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
SNAI2O43623 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SNAI2O43623 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
SNAI2O43623 AC008556.1-201ENST00000610908 2040 ntBASIC13.63□□□□□ -0.23
SNAI2O43623 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
SNAI2O43623 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNAI2O43623 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNAI2O43623 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC13.62□□□□□ -0.23
SNAI2O43623 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC13.62□□□□□ -0.23
SNAI2O43623 AL357033.4-201ENST00000617703 1807 ntBASIC13.62□□□□□ -0.23
SNAI2O43623 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC13.62□□□□□ -0.23
SNAI2O43623 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNAI2O43623 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
SNAI2O43623 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SNAI2O43623 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNAI2O43623 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
SNAI2O43623 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
SNAI2O43623 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNAI2O43623 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNAI2O43623 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC13.62□□□□□ -0.23
SNAI2O43623 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SNAI2O43623 POR-209ENST00000439269 1858 ntTSL 2 BASIC13.62□□□□□ -0.23
SNAI2O43623 GUSBP6-202ENST00000438529 1198 ntBASIC13.62□□□□□ -0.23
SNAI2O43623 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SNAI2O43623 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SNAI2O43623 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SNAI2O43623 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC13.62□□□□□ -0.23
SNAI2O43623 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC13.62□□□□□ -0.23
SNAI2O43623 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNAI2O43623 AC004264.1-201ENST00000608354 794 ntBASIC13.62□□□□□ -0.23
SNAI2O43623 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC13.62□□□□□ -0.23
SNAI2O43623 Six3os1_6.1-201ENST00000620790 196 ntBASIC13.62□□□□□ -0.23
SNAI2O43623 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNAI2O43623 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNAI2O43623 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNAI2O43623 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC13.62□□□□□ -0.23
SNAI2O43623 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
SNAI2O43623 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms