Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC074051.2-201ENST00000565115 352 ntBASIC18.34■□□□□ 0.53
SMAD6O43541 AC012615.1-201ENST00000565797 1299 ntBASIC18.34■□□□□ 0.53
SMAD6O43541 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.34■□□□□ 0.53
SMAD6O43541 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMAD6O43541 AL353801.3-201ENST00000609898 542 ntBASIC18.34■□□□□ 0.53
SMAD6O43541 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.34■□□□□ 0.53
SMAD6O43541 AC009154.2-201ENST00000621177 724 ntBASIC18.34■□□□□ 0.53
SMAD6O43541 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMAD6O43541 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMAD6O43541 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SMAD6O43541 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SMAD6O43541 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMAD6O43541 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMAD6O43541 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMAD6O43541 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMAD6O43541 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SMAD6O43541 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SMAD6O43541 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SMAD6O43541 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.33■□□□□ 0.53
SMAD6O43541 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SMAD6O43541 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.33■□□□□ 0.53
SMAD6O43541 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SMAD6O43541 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
SMAD6O43541 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SMAD6O43541 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SMAD6O43541 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
SMAD6O43541 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
SMAD6O43541 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.33■□□□□ 0.53
SMAD6O43541 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SMAD6O43541 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.33■□□□□ 0.52
SMAD6O43541 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
SMAD6O43541 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMAD6O43541 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMAD6O43541 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.33■□□□□ 0.52
SMAD6O43541 IGHV3-47-201ENST00000425060 335 ntBASIC18.33■□□□□ 0.52
SMAD6O43541 KRT17P6-201ENST00000453795 1220 ntBASIC18.33■□□□□ 0.52
SMAD6O43541 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.33■□□□□ 0.52
SMAD6O43541 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SMAD6O43541 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.33■□□□□ 0.52
SMAD6O43541 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.33■□□□□ 0.52
SMAD6O43541 AC011840.4-201ENST00000578471 627 ntBASIC18.33■□□□□ 0.52
SMAD6O43541 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.33■□□□□ 0.52
SMAD6O43541 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SMAD6O43541 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.33■□□□□ 0.52
SMAD6O43541 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMAD6O43541 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMAD6O43541 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
SMAD6O43541 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.33■□□□□ 0.52
SMAD6O43541 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SMAD6O43541 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMAD6O43541 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMAD6O43541 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.32■□□□□ 0.52
SMAD6O43541 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SMAD6O43541 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SMAD6O43541 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMAD6O43541 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
SMAD6O43541 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SMAD6O43541 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SMAD6O43541 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.32■□□□□ 0.52
SMAD6O43541 AL096828.2-201ENST00000567259 1965 ntBASIC18.32■□□□□ 0.52
SMAD6O43541 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SMAD6O43541 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMAD6O43541 AC093010.1-201ENST00000473625 1624 ntBASIC18.32■□□□□ 0.52
SMAD6O43541 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMAD6O43541 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.32■□□□□ 0.52
SMAD6O43541 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SMAD6O43541 AC104819.1-201ENST00000504587 486 ntBASIC18.32■□□□□ 0.52
SMAD6O43541 PRELID1P1-202ENST00000567272 903 ntBASIC18.32■□□□□ 0.52
SMAD6O43541 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SMAD6O43541 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
SMAD6O43541 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMAD6O43541 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMAD6O43541 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.32■□□□□ 0.52
SMAD6O43541 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.32■□□□□ 0.52
SMAD6O43541 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SMAD6O43541 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SMAD6O43541 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SMAD6O43541 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SMAD6O43541 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMAD6O43541 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMAD6O43541 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SMAD6O43541 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SMAD6O43541 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMAD6O43541 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SMAD6O43541 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMAD6O43541 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.31■□□□□ 0.52
SMAD6O43541 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
SMAD6O43541 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.31■□□□□ 0.52
SMAD6O43541 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMAD6O43541 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMAD6O43541 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMAD6O43541 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMAD6O43541 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SMAD6O43541 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SMAD6O43541 KRT18P65-201ENST00000439811 1286 ntBASIC18.31■□□□□ 0.52
SMAD6O43541 MTCL1P1-201ENST00000446207 792 ntBASIC18.31■□□□□ 0.52
SMAD6O43541 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.31■□□□□ 0.52
SMAD6O43541 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.31■□□□□ 0.52
SMAD6O43541 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.31■□□□□ 0.52
SMAD6O43541 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms