Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
ABCC4O15439 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
ABCC4O15439 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC23.11■■□□□ 1.29
ABCC4O15439 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
ABCC4O15439 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
ABCC4O15439 KRT89P-201ENST00000620027 1478 ntBASIC23.11■■□□□ 1.29
ABCC4O15439 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
ABCC4O15439 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
ABCC4O15439 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ABCC4O15439 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
ABCC4O15439 FOSL1P1-201ENST00000511041 816 ntBASIC23.1■■□□□ 1.29
ABCC4O15439 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC23.1■■□□□ 1.29
ABCC4O15439 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC23.1■■□□□ 1.29
ABCC4O15439 AC012615.1-201ENST00000565797 1299 ntBASIC23.1■■□□□ 1.29
ABCC4O15439 AC104692.2-201ENST00000603054 253 ntBASIC23.1■■□□□ 1.29
ABCC4O15439 AL390719.2-201ENST00000606993 987 ntBASIC23.1■■□□□ 1.29
ABCC4O15439 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC23.1■■□□□ 1.29
ABCC4O15439 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC23.1■■□□□ 1.29
ABCC4O15439 SP100-208ENST00000427101 1922 ntTSL 2 BASIC23.1■■□□□ 1.29
ABCC4O15439 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC23.1■■□□□ 1.29
ABCC4O15439 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ABCC4O15439 AC132938.6-201ENST00000623828 1655 ntBASIC23.1■■□□□ 1.29
ABCC4O15439 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ABCC4O15439 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ABCC4O15439 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
ABCC4O15439 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ABCC4O15439 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ABCC4O15439 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
ABCC4O15439 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC23.1■■□□□ 1.29
ABCC4O15439 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC23.1■■□□□ 1.29
ABCC4O15439 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
ABCC4O15439 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC23.09■■□□□ 1.29
ABCC4O15439 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ABCC4O15439 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
ABCC4O15439 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ABCC4O15439 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
ABCC4O15439 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC23.09■■□□□ 1.29
ABCC4O15439 AC079781.3-201ENST00000449110 356 ntBASIC23.09■■□□□ 1.29
ABCC4O15439 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC23.09■■□□□ 1.29
ABCC4O15439 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
ABCC4O15439 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC23.09■■□□□ 1.29
ABCC4O15439 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
ABCC4O15439 AC005332.3-201ENST00000589904 676 ntBASIC23.09■■□□□ 1.29
ABCC4O15439 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC23.09■■□□□ 1.29
ABCC4O15439 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
ABCC4O15439 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC23.09■■□□□ 1.29
ABCC4O15439 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC23.09■■□□□ 1.29
ABCC4O15439 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC23.09■■□□□ 1.29
ABCC4O15439 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
ABCC4O15439 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
ABCC4O15439 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC23.09■■□□□ 1.29
ABCC4O15439 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
ABCC4O15439 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
ABCC4O15439 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
ABCC4O15439 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ABCC4O15439 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
ABCC4O15439 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC23.09■■□□□ 1.29
ABCC4O15439 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ABCC4O15439 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
ABCC4O15439 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC23.08■■□□□ 1.29
ABCC4O15439 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC23.08■■□□□ 1.29
ABCC4O15439 KIRREL3-AS3-201ENST00000404882 831 ntBASIC23.08■■□□□ 1.29
ABCC4O15439 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC23.08■■□□□ 1.29
ABCC4O15439 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC23.08■■□□□ 1.29
ABCC4O15439 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC23.08■■□□□ 1.29
ABCC4O15439 AC113404.2-201ENST00000507884 177 ntBASIC23.08■■□□□ 1.29
ABCC4O15439 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC23.08■■□□□ 1.29
ABCC4O15439 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
ABCC4O15439 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
ABCC4O15439 REXO1L9P-201ENST00000604264 2108 ntBASIC23.08■■□□□ 1.29
ABCC4O15439 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC23.08■■□□□ 1.29
ABCC4O15439 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC23.08■■□□□ 1.29
ABCC4O15439 NOC2LP1-202ENST00000452600 2235 ntBASIC23.08■■□□□ 1.29
ABCC4O15439 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
ABCC4O15439 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
ABCC4O15439 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
ABCC4O15439 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
ABCC4O15439 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
ABCC4O15439 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
ABCC4O15439 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
ABCC4O15439 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC23.08■■□□□ 1.28
ABCC4O15439 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC23.08■■□□□ 1.28
ABCC4O15439 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC23.08■■□□□ 1.28
ABCC4O15439 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC23.08■■□□□ 1.28
ABCC4O15439 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
ABCC4O15439 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
ABCC4O15439 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
ABCC4O15439 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
ABCC4O15439 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
ABCC4O15439 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC23.08■■□□□ 1.28
ABCC4O15439 HES2-202ENST00000377836 507 ntTSL 2 BASIC23.08■■□□□ 1.28
ABCC4O15439 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC23.08■■□□□ 1.28
ABCC4O15439 AL121772.3-201ENST00000610840 674 ntBASIC23.08■■□□□ 1.28
ABCC4O15439 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
ABCC4O15439 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC23.08■■□□□ 1.28
ABCC4O15439 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC23.08■■□□□ 1.28
ABCC4O15439 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC23.07■■□□□ 1.28
ABCC4O15439 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC23.07■■□□□ 1.28
ABCC4O15439 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
ABCC4O15439 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC23.07■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms