Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC19.64■□□□□ 0.73
TNRC18O15417 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TNRC18O15417 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TNRC18O15417 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC19.64■□□□□ 0.73
TNRC18O15417 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNRC18O15417 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
TNRC18O15417 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.64■□□□□ 0.73
TNRC18O15417 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNRC18O15417 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNRC18O15417 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNRC18O15417 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNRC18O15417 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNRC18O15417 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.63■□□□□ 0.73
TNRC18O15417 AC119751.2-201ENST00000504529 210 ntBASIC19.63■□□□□ 0.73
TNRC18O15417 MIR4538-201ENST00000581377 78 ntBASIC19.63■□□□□ 0.73
TNRC18O15417 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.63■□□□□ 0.73
TNRC18O15417 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC19.63■□□□□ 0.73
TNRC18O15417 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.63■□□□□ 0.73
TNRC18O15417 AC008667.4-201ENST00000607370 168 ntBASIC19.63■□□□□ 0.73
TNRC18O15417 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNRC18O15417 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNRC18O15417 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.63■□□□□ 0.73
TNRC18O15417 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.63■□□□□ 0.73
TNRC18O15417 AC008677.1-201ENST00000519230 1561 ntBASIC19.63■□□□□ 0.73
TNRC18O15417 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNRC18O15417 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TNRC18O15417 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.63■□□□□ 0.73
TNRC18O15417 AC092933.1-201ENST00000393644 945 ntBASIC19.63■□□□□ 0.73
TNRC18O15417 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TNRC18O15417 AC096734.2-201ENST00000562054 433 ntBASIC19.63■□□□□ 0.73
TNRC18O15417 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC19.63■□□□□ 0.73
TNRC18O15417 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC19.63■□□□□ 0.73
TNRC18O15417 AC099522.2-201ENST00000607001 744 ntBASIC19.63■□□□□ 0.73
TNRC18O15417 AC009154.2-201ENST00000621177 724 ntBASIC19.63■□□□□ 0.73
TNRC18O15417 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TNRC18O15417 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TNRC18O15417 KRT8P50-201ENST00000562022 1438 ntBASIC19.63■□□□□ 0.73
TNRC18O15417 REXO1L6P-201ENST00000603433 1515 ntBASIC19.62■□□□□ 0.73
TNRC18O15417 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TNRC18O15417 SPDYE21P-201ENST00000413323 827 ntBASIC19.62■□□□□ 0.73
TNRC18O15417 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TNRC18O15417 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC19.62■□□□□ 0.73
TNRC18O15417 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TNRC18O15417 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
TNRC18O15417 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TNRC18O15417 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.62■□□□□ 0.73
TNRC18O15417 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TNRC18O15417 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TNRC18O15417 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TNRC18O15417 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TNRC18O15417 AC129492.6-201ENST00000611383 1305 ntBASIC19.62■□□□□ 0.73
TNRC18O15417 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TNRC18O15417 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TNRC18O15417 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.62■□□□□ 0.73
TNRC18O15417 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNRC18O15417 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC19.61■□□□□ 0.73
TNRC18O15417 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.61■□□□□ 0.73
TNRC18O15417 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNRC18O15417 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNRC18O15417 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC19.61■□□□□ 0.73
TNRC18O15417 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.61■□□□□ 0.73
TNRC18O15417 PTPA-220ENST00000436883 532 ntTSL 4 BASIC19.61■□□□□ 0.73
TNRC18O15417 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TNRC18O15417 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
TNRC18O15417 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.61■□□□□ 0.73
TNRC18O15417 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNRC18O15417 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.61■□□□□ 0.73
TNRC18O15417 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
TNRC18O15417 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
TNRC18O15417 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.61■□□□□ 0.73
TNRC18O15417 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNRC18O15417 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TNRC18O15417 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNRC18O15417 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNRC18O15417 AC092580.3-201ENST00000430932 139 ntBASIC19.61■□□□□ 0.73
TNRC18O15417 AC007967.3-201ENST00000434308 558 ntBASIC19.61■□□□□ 0.73
TNRC18O15417 AC004890.2-204ENST00000481968 304 ntBASIC19.61■□□□□ 0.73
TNRC18O15417 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
TNRC18O15417 RN7SL190P-201ENST00000582519 257 ntBASIC19.61■□□□□ 0.73
TNRC18O15417 AC003101.2-201ENST00000612557 442 ntBASIC19.61■□□□□ 0.73
TNRC18O15417 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNRC18O15417 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TNRC18O15417 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.6■□□□□ 0.73
TNRC18O15417 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNRC18O15417 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNRC18O15417 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNRC18O15417 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
TNRC18O15417 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNRC18O15417 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TNRC18O15417 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNRC18O15417 NCF1C-201ENST00000438382 1427 ntBASIC19.6■□□□□ 0.73
TNRC18O15417 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TNRC18O15417 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNRC18O15417 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TNRC18O15417 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.6■□□□□ 0.73
TNRC18O15417 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TNRC18O15417 RPF1-202ENST00000370656 724 ntTSL 2 BASIC19.6■□□□□ 0.73
TNRC18O15417 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNRC18O15417 KRT8P48-201ENST00000515599 1220 ntBASIC19.6■□□□□ 0.73
TNRC18O15417 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms