Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SOX1O00570 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SOX1O00570 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SOX1O00570 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SOX1O00570 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.26■□□□□ 0.67
SOX1O00570 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SOX1O00570 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.26■□□□□ 0.67
SOX1O00570 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.26■□□□□ 0.67
SOX1O00570 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.26■□□□□ 0.67
SOX1O00570 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SOX1O00570 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.26■□□□□ 0.67
SOX1O00570 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SOX1O00570 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.25■□□□□ 0.67
SOX1O00570 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SOX1O00570 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.25■□□□□ 0.67
SOX1O00570 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SOX1O00570 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
SOX1O00570 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SOX1O00570 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.25■□□□□ 0.67
SOX1O00570 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SOX1O00570 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SOX1O00570 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.25■□□□□ 0.67
SOX1O00570 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SOX1O00570 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SOX1O00570 ARSEP1-201ENST00000420443 635 ntBASIC19.25■□□□□ 0.67
SOX1O00570 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.25■□□□□ 0.67
SOX1O00570 AC074386.1-202ENST00000463561 864 ntBASIC19.25■□□□□ 0.67
SOX1O00570 IGHV3-65-201ENST00000523210 341 ntBASIC19.25■□□□□ 0.67
SOX1O00570 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
SOX1O00570 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.25■□□□□ 0.67
SOX1O00570 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SOX1O00570 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SOX1O00570 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SOX1O00570 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.25■□□□□ 0.67
SOX1O00570 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SOX1O00570 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.24■□□□□ 0.67
SOX1O00570 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SOX1O00570 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SOX1O00570 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SOX1O00570 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SOX1O00570 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.24■□□□□ 0.67
SOX1O00570 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SOX1O00570 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC19.24■□□□□ 0.67
SOX1O00570 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SOX1O00570 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.24■□□□□ 0.67
SOX1O00570 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.24■□□□□ 0.67
SOX1O00570 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SOX1O00570 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SOX1O00570 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SOX1O00570 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.24■□□□□ 0.67
SOX1O00570 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.24■□□□□ 0.67
SOX1O00570 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.24■□□□□ 0.67
SOX1O00570 FAM207CP-201ENST00000443486 507 ntBASIC19.24■□□□□ 0.67
SOX1O00570 CRB3P1-201ENST00000449338 276 ntBASIC19.24■□□□□ 0.67
SOX1O00570 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.24■□□□□ 0.67
SOX1O00570 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SOX1O00570 AC004706.3-202ENST00000621574 984 ntBASIC19.24■□□□□ 0.67
SOX1O00570 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SOX1O00570 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SOX1O00570 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.24■□□□□ 0.67
SOX1O00570 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SOX1O00570 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SOX1O00570 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SOX1O00570 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SOX1O00570 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.24■□□□□ 0.67
SOX1O00570 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.24■□□□□ 0.67
SOX1O00570 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SOX1O00570 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SOX1O00570 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SOX1O00570 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SOX1O00570 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SOX1O00570 NME2P1-201ENST00000426182 414 ntBASIC19.23■□□□□ 0.67
SOX1O00570 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.23■□□□□ 0.67
SOX1O00570 PRYP5-201ENST00000451909 266 ntBASIC19.23■□□□□ 0.67
SOX1O00570 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.23■□□□□ 0.67
SOX1O00570 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC19.23■□□□□ 0.67
SOX1O00570 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.23■□□□□ 0.67
SOX1O00570 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.23■□□□□ 0.67
SOX1O00570 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.23■□□□□ 0.67
SOX1O00570 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SOX1O00570 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.23■□□□□ 0.67
SOX1O00570 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.23■□□□□ 0.67
SOX1O00570 HFE2-206ENST00000634927 506 ntTSL 4 BASIC19.23■□□□□ 0.67
SOX1O00570 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SOX1O00570 PMPCAP1-201ENST00000508114 1576 ntBASIC19.23■□□□□ 0.67
SOX1O00570 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SOX1O00570 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SOX1O00570 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.22■□□□□ 0.67
SOX1O00570 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SOX1O00570 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.22■□□□□ 0.67
SOX1O00570 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SOX1O00570 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SOX1O00570 AL163051.1-201ENST00000569214 1512 ntBASIC19.22■□□□□ 0.67
SOX1O00570 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SOX1O00570 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SOX1O00570 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.22■□□□□ 0.67
SOX1O00570 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.22■□□□□ 0.67
SOX1O00570 GOLGA6L11P-201ENST00000417252 1298 ntBASIC19.22■□□□□ 0.67
SOX1O00570 SLC25A6P5-201ENST00000435663 894 ntBASIC19.22■□□□□ 0.67
SOX1O00570 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms