Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
SDCBPO00560 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC15.51■□□□□ 0.07
SDCBPO00560 DECR2-212ENST00000627716 352 ntTSL 2 BASIC15.51■□□□□ 0.07
SDCBPO00560 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SDCBPO00560 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SDCBPO00560 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SDCBPO00560 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SDCBPO00560 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SDCBPO00560 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SDCBPO00560 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SDCBPO00560 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.51■□□□□ 0.07
SDCBPO00560 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.51■□□□□ 0.07
SDCBPO00560 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SDCBPO00560 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SDCBPO00560 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.51■□□□□ 0.07
SDCBPO00560 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SDCBPO00560 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC15.51■□□□□ 0.07
SDCBPO00560 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
SDCBPO00560 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.5■□□□□ 0.07
SDCBPO00560 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.5■□□□□ 0.07
SDCBPO00560 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.5■□□□□ 0.07
SDCBPO00560 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.5■□□□□ 0.07
SDCBPO00560 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SDCBPO00560 MME-217ENST00000616757 1315 ntTSL 5 BASIC15.5■□□□□ 0.07
SDCBPO00560 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SDCBPO00560 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SDCBPO00560 RCC2P3-201ENST00000418112 1537 ntBASIC15.5■□□□□ 0.07
SDCBPO00560 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SDCBPO00560 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SDCBPO00560 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC15.5■□□□□ 0.07
SDCBPO00560 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
SDCBPO00560 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC15.5■□□□□ 0.07
SDCBPO00560 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC15.5■□□□□ 0.07
SDCBPO00560 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.5■□□□□ 0.07
SDCBPO00560 AP000692.2-201ENST00000608391 879 ntBASIC15.5■□□□□ 0.07
SDCBPO00560 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SDCBPO00560 AL049637.2-201ENST00000641778 930 ntBASIC15.5■□□□□ 0.07
SDCBPO00560 PRORSD1P-202ENST00000563365 2154 ntBASIC15.5■□□□□ 0.07
SDCBPO00560 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SDCBPO00560 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
SDCBPO00560 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.5■□□□□ 0.07
SDCBPO00560 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SDCBPO00560 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
SDCBPO00560 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
SDCBPO00560 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SDCBPO00560 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SDCBPO00560 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
SDCBPO00560 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SDCBPO00560 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SDCBPO00560 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SDCBPO00560 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
SDCBPO00560 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SDCBPO00560 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SDCBPO00560 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SDCBPO00560 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC15.49■□□□□ 0.07
SDCBPO00560 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC15.49■□□□□ 0.07
SDCBPO00560 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SDCBPO00560 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SDCBPO00560 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SDCBPO00560 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SDCBPO00560 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SDCBPO00560 PCDHA12-202ENST00000613593 2588 ntBASIC15.49■□□□□ 0.07
SDCBPO00560 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SDCBPO00560 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
SDCBPO00560 AC012317.2-201ENST00000623305 2251 ntBASIC15.49■□□□□ 0.07
SDCBPO00560 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.49■□□□□ 0.07
SDCBPO00560 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SDCBPO00560 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
SDCBPO00560 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SDCBPO00560 BAALC-201ENST00000297574 801 ntTSL 3 BASIC15.49■□□□□ 0.07
SDCBPO00560 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SDCBPO00560 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
SDCBPO00560 MESTP1-201ENST00000404287 994 ntBASIC15.49■□□□□ 0.07
SDCBPO00560 AL355355.2-201ENST00000442321 338 ntBASIC15.49■□□□□ 0.07
SDCBPO00560 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SDCBPO00560 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.49■□□□□ 0.07
SDCBPO00560 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15.49■□□□□ 0.07
SDCBPO00560 SLC25A1P4-201ENST00000567977 778 ntBASIC15.49■□□□□ 0.07
SDCBPO00560 AC233702.5-201ENST00000584107 538 ntBASIC15.49■□□□□ 0.07
SDCBPO00560 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SDCBPO00560 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.49■□□□□ 0.07
SDCBPO00560 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC15.49■□□□□ 0.07
SDCBPO00560 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
SDCBPO00560 AC113410.3-201ENST00000623366 203 ntBASIC15.49■□□□□ 0.07
SDCBPO00560 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
SDCBPO00560 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SDCBPO00560 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SDCBPO00560 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SDCBPO00560 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SDCBPO00560 AC009053.2-201ENST00000563701 2365 ntBASIC15.49■□□□□ 0.07
SDCBPO00560 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
SDCBPO00560 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SDCBPO00560 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.49■□□□□ 0.07
SDCBPO00560 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.49■□□□□ 0.07
SDCBPO00560 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.49■□□□□ 0.07
SDCBPO00560 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
SDCBPO00560 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
SDCBPO00560 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.48■□□□□ 0.07
SDCBPO00560 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.48■□□□□ 0.07
SDCBPO00560 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms