Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHL1O00533 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CHL1O00533 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHL1O00533 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHL1O00533 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHL1O00533 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC23.32■■□□□ 1.32
CHL1O00533 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHL1O00533 KRT18P31-201ENST00000506277 1292 ntBASIC23.32■■□□□ 1.32
CHL1O00533 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC23.32■■□□□ 1.32
CHL1O00533 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC23.32■■□□□ 1.32
CHL1O00533 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC23.32■■□□□ 1.32
CHL1O00533 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CHL1O00533 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHL1O00533 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC23.32■■□□□ 1.32
CHL1O00533 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHL1O00533 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHL1O00533 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC23.32■■□□□ 1.32
CHL1O00533 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHL1O00533 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC23.32■■□□□ 1.32
CHL1O00533 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHL1O00533 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHL1O00533 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC23.31■■□□□ 1.32
CHL1O00533 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
CHL1O00533 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
CHL1O00533 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
CHL1O00533 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC23.31■■□□□ 1.32
CHL1O00533 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHL1O00533 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CHL1O00533 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHL1O00533 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHL1O00533 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHL1O00533 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC23.31■■□□□ 1.32
CHL1O00533 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHL1O00533 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC23.31■■□□□ 1.32
CHL1O00533 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC23.31■■□□□ 1.32
CHL1O00533 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CHL1O00533 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHL1O00533 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHL1O00533 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
CHL1O00533 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHL1O00533 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHL1O00533 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHL1O00533 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
CHL1O00533 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC23.3■■□□□ 1.32
CHL1O00533 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
CHL1O00533 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHL1O00533 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC23.3■■□□□ 1.32
CHL1O00533 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHL1O00533 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHL1O00533 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC23.3■■□□□ 1.32
CHL1O00533 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHL1O00533 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHL1O00533 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
CHL1O00533 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHL1O00533 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
CHL1O00533 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC23.3■■□□□ 1.32
CHL1O00533 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC23.3■■□□□ 1.32
CHL1O00533 MEG3-211ENST00000452514 461 ntTSL 3 BASIC23.3■■□□□ 1.32
CHL1O00533 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC23.3■■□□□ 1.32
CHL1O00533 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC23.3■■□□□ 1.32
CHL1O00533 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC23.3■■□□□ 1.32
CHL1O00533 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC23.3■■□□□ 1.32
CHL1O00533 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
CHL1O00533 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
CHL1O00533 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
CHL1O00533 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHL1O00533 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
CHL1O00533 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC23.3■■□□□ 1.32
CHL1O00533 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
CHL1O00533 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHL1O00533 AC120498.9-201ENST00000339021 3867 ntBASIC23.29■■□□□ 1.32
CHL1O00533 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
CHL1O00533 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHL1O00533 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHL1O00533 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHL1O00533 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHL1O00533 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CHL1O00533 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CHL1O00533 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC23.29■■□□□ 1.32
CHL1O00533 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC23.29■■□□□ 1.32
CHL1O00533 POM121L3P-201ENST00000419331 1163 ntBASIC23.29■■□□□ 1.32
CHL1O00533 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC23.29■■□□□ 1.32
CHL1O00533 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC23.29■■□□□ 1.32
CHL1O00533 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC23.29■■□□□ 1.32
CHL1O00533 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHL1O00533 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC23.29■■□□□ 1.32
CHL1O00533 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CHL1O00533 AC138894.3-201ENST00000603787 634 ntBASIC23.29■■□□□ 1.32
CHL1O00533 AL121772.3-201ENST00000610840 674 ntBASIC23.29■■□□□ 1.32
CHL1O00533 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHL1O00533 IRF5-214ENST00000613821 595 ntTSL 5 BASIC23.29■■□□□ 1.32
CHL1O00533 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC23.29■■□□□ 1.32
CHL1O00533 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC23.29■■□□□ 1.32
CHL1O00533 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHL1O00533 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC23.29■■□□□ 1.32
CHL1O00533 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC23.29■■□□□ 1.32
CHL1O00533 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC23.28■■□□□ 1.32
CHL1O00533 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
CHL1O00533 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CHL1O00533 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms