Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TNFRSF11BO00300 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF11BO00300 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF11BO00300 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF11BO00300 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF11BO00300 AL353807.1-201ENST00000427475 662 ntBASIC16.86■□□□□ 0.29
TNFRSF11BO00300 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.86■□□□□ 0.29
TNFRSF11BO00300 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.86■□□□□ 0.29
TNFRSF11BO00300 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.86■□□□□ 0.29
TNFRSF11BO00300 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.86■□□□□ 0.29
TNFRSF11BO00300 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF11BO00300 PCDHA12-202ENST00000613593 2588 ntBASIC16.86■□□□□ 0.29
TNFRSF11BO00300 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF11BO00300 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF11BO00300 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF11BO00300 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TNFRSF11BO00300 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF11BO00300 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF11BO00300 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF11BO00300 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF11BO00300 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TNFRSF11BO00300 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TNFRSF11BO00300 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF11BO00300 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF11BO00300 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNFRSF11BO00300 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TNFRSF11BO00300 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
TNFRSF11BO00300 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNFRSF11BO00300 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.85■□□□□ 0.29
TNFRSF11BO00300 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TNFRSF11BO00300 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNFRSF11BO00300 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.85■□□□□ 0.29
TNFRSF11BO00300 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TNFRSF11BO00300 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNFRSF11BO00300 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNFRSF11BO00300 AC011506.1-201ENST00000474329 610 ntBASIC16.85■□□□□ 0.29
TNFRSF11BO00300 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.85■□□□□ 0.29
TNFRSF11BO00300 RN7SL471P-201ENST00000580476 299 ntBASIC16.85■□□□□ 0.29
TNFRSF11BO00300 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.85■□□□□ 0.29
TNFRSF11BO00300 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TNFRSF11BO00300 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.85■□□□□ 0.29
TNFRSF11BO00300 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
TNFRSF11BO00300 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TNFRSF11BO00300 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TNFRSF11BO00300 AC141586.5-201ENST00000624546 2050 ntBASIC16.85■□□□□ 0.29
TNFRSF11BO00300 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TNFRSF11BO00300 PP12613-201ENST00000424958 2230 ntBASIC16.85■□□□□ 0.29
TNFRSF11BO00300 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TNFRSF11BO00300 AC080080.1-201ENST00000625121 2420 ntBASIC16.85■□□□□ 0.29
TNFRSF11BO00300 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.85■□□□□ 0.29
TNFRSF11BO00300 GPAT2P1-201ENST00000444924 1672 ntBASIC16.85■□□□□ 0.29
TNFRSF11BO00300 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.84■□□□□ 0.29
TNFRSF11BO00300 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.84■□□□□ 0.29
TNFRSF11BO00300 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.84■□□□□ 0.29
TNFRSF11BO00300 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TNFRSF11BO00300 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNFRSF11BO00300 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.84■□□□□ 0.29
TNFRSF11BO00300 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.84■□□□□ 0.29
TNFRSF11BO00300 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNFRSF11BO00300 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNFRSF11BO00300 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
TNFRSF11BO00300 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNFRSF11BO00300 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
TNFRSF11BO00300 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.84■□□□□ 0.29
TNFRSF11BO00300 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNFRSF11BO00300 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.84■□□□□ 0.29
TNFRSF11BO00300 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.84■□□□□ 0.29
TNFRSF11BO00300 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
TNFRSF11BO00300 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.84■□□□□ 0.29
TNFRSF11BO00300 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.84■□□□□ 0.29
TNFRSF11BO00300 MIR6786-201ENST00000616843 113 ntBASIC16.84■□□□□ 0.29
TNFRSF11BO00300 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNFRSF11BO00300 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.84■□□□□ 0.29
TNFRSF11BO00300 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.84■□□□□ 0.29
TNFRSF11BO00300 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TNFRSF11BO00300 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNFRSF11BO00300 SDHAP2-201ENST00000455183 2001 ntBASIC16.84■□□□□ 0.29
TNFRSF11BO00300 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.84■□□□□ 0.29
TNFRSF11BO00300 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TNFRSF11BO00300 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.84■□□□□ 0.29
TNFRSF11BO00300 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.83■□□□□ 0.29
TNFRSF11BO00300 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TNFRSF11BO00300 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TNFRSF11BO00300 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.29
TNFRSF11BO00300 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.83■□□□□ 0.29
TNFRSF11BO00300 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TNFRSF11BO00300 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TNFRSF11BO00300 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TNFRSF11BO00300 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TNFRSF11BO00300 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.83■□□□□ 0.28
TNFRSF11BO00300 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.83■□□□□ 0.28
TNFRSF11BO00300 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TNFRSF11BO00300 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TNFRSF11BO00300 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TNFRSF11BO00300 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.83■□□□□ 0.28
TNFRSF11BO00300 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TNFRSF11BO00300 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TNFRSF11BO00300 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TNFRSF11BO00300 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.83■□□□□ 0.28
TNFRSF11BO00300 AC099398.1-201ENST00000567919 2776 ntBASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms