Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01546A6NGU7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
LINC01546A6NGU7 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC01546A6NGU7 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
LINC01546A6NGU7 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
LINC01546A6NGU7 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC12.83□□□□□ -0.35
LINC01546A6NGU7 BANP-204ENST00000393208 2283 ntTSL 2 BASIC12.83□□□□□ -0.35
LINC01546A6NGU7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.35
LINC01546A6NGU7 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
LINC01546A6NGU7 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
LINC01546A6NGU7 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01546A6NGU7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC12.83□□□□□ -0.36
LINC01546A6NGU7 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01546A6NGU7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01546A6NGU7 AC016396.2-201ENST00000562575 1417 ntBASIC12.83□□□□□ -0.36
LINC01546A6NGU7 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01546A6NGU7 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01546A6NGU7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC12.83□□□□□ -0.36
LINC01546A6NGU7 BX276092.2-201ENST00000417668 665 ntBASIC12.83□□□□□ -0.36
LINC01546A6NGU7 AC006015.1-201ENST00000429970 570 ntBASIC12.83□□□□□ -0.36
LINC01546A6NGU7 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC12.83□□□□□ -0.36
LINC01546A6NGU7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC12.83□□□□□ -0.36
LINC01546A6NGU7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01546A6NGU7 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01546A6NGU7 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01546A6NGU7 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC12.83□□□□□ -0.36
LINC01546A6NGU7 MDK-213ENST00000617138 635 ntTSL 2 BASIC12.83□□□□□ -0.36
LINC01546A6NGU7 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01546A6NGU7 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01546A6NGU7 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01546A6NGU7 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01546A6NGU7 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01546A6NGU7 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC12.83□□□□□ -0.36
LINC01546A6NGU7 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
LINC01546A6NGU7 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01546A6NGU7 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
LINC01546A6NGU7 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01546A6NGU7 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
LINC01546A6NGU7 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
LINC01546A6NGU7 AC060834.1-201ENST00000443027 2032 ntBASIC12.83□□□□□ -0.36
LINC01546A6NGU7 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC12.83□□□□□ -0.36
LINC01546A6NGU7 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
LINC01546A6NGU7 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
LINC01546A6NGU7 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01546A6NGU7 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC01546A6NGU7 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC12.83□□□□□ -0.36
LINC01546A6NGU7 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01546A6NGU7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01546A6NGU7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC12.82□□□□□ -0.36
LINC01546A6NGU7 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01546A6NGU7 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01546A6NGU7 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01546A6NGU7 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
LINC01546A6NGU7 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01546A6NGU7 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01546A6NGU7 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01546A6NGU7 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
LINC01546A6NGU7 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01546A6NGU7 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01546A6NGU7 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01546A6NGU7 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01546A6NGU7 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01546A6NGU7 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
LINC01546A6NGU7 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
LINC01546A6NGU7 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
LINC01546A6NGU7 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
LINC01546A6NGU7 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC12.82□□□□□ -0.36
LINC01546A6NGU7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC12.82□□□□□ -0.36
LINC01546A6NGU7 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC12.82□□□□□ -0.36
LINC01546A6NGU7 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC01546A6NGU7 OR2A1-AS1-201ENST00000462305 773 ntBASIC12.82□□□□□ -0.36
LINC01546A6NGU7 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC12.82□□□□□ -0.36
LINC01546A6NGU7 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC01546A6NGU7 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
LINC01546A6NGU7 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01546A6NGU7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC12.82□□□□□ -0.36
LINC01546A6NGU7 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01546A6NGU7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
LINC01546A6NGU7 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01546A6NGU7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01546A6NGU7 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
LINC01546A6NGU7 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01546A6NGU7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
LINC01546A6NGU7 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01546A6NGU7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01546A6NGU7 AL596257.1-201ENST00000641463 2694 ntBASIC12.82□□□□□ -0.36
LINC01546A6NGU7 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01546A6NGU7 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC01546A6NGU7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
LINC01546A6NGU7 CYP2T1P-202ENST00000641596 2535 ntBASIC12.82□□□□□ -0.36
LINC01546A6NGU7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01546A6NGU7 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01546A6NGU7 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01546A6NGU7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01546A6NGU7 PCDHB17P-201ENST00000539533 2393 ntBASIC12.81□□□□□ -0.36
LINC01546A6NGU7 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC12.81□□□□□ -0.36
LINC01546A6NGU7 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC01546A6NGU7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01546A6NGU7 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
LINC01546A6NGU7 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms