Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRDV1A0A1B0GX56 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
TRDV1A0A1B0GX56 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRDV1A0A1B0GX56 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRDV1A0A1B0GX56 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.02■□□□□ 0.15
TRDV1A0A1B0GX56 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRDV1A0A1B0GX56 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
TRDV1A0A1B0GX56 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.02■□□□□ 0.15
TRDV1A0A1B0GX56 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.01■□□□□ 0.15
TRDV1A0A1B0GX56 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.01■□□□□ 0.15
TRDV1A0A1B0GX56 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRDV1A0A1B0GX56 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRDV1A0A1B0GX56 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRDV1A0A1B0GX56 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRDV1A0A1B0GX56 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRDV1A0A1B0GX56 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRDV1A0A1B0GX56 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRDV1A0A1B0GX56 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
TRDV1A0A1B0GX56 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRDV1A0A1B0GX56 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.01■□□□□ 0.15
TRDV1A0A1B0GX56 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.01■□□□□ 0.15
TRDV1A0A1B0GX56 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRDV1A0A1B0GX56 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRDV1A0A1B0GX56 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRDV1A0A1B0GX56 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRDV1A0A1B0GX56 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRDV1A0A1B0GX56 POM121L13P-201ENST00000422362 380 ntBASIC16.01■□□□□ 0.15
TRDV1A0A1B0GX56 CDCA4P2-201ENST00000441182 718 ntBASIC16.01■□□□□ 0.15
TRDV1A0A1B0GX56 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC16.01■□□□□ 0.15
TRDV1A0A1B0GX56 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRDV1A0A1B0GX56 AC083906.2-201ENST00000511578 360 ntBASIC16.01■□□□□ 0.15
TRDV1A0A1B0GX56 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
TRDV1A0A1B0GX56 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TRDV1A0A1B0GX56 MIR4758-201ENST00000577688 71 ntBASIC16.01■□□□□ 0.15
TRDV1A0A1B0GX56 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.01■□□□□ 0.15
TRDV1A0A1B0GX56 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.01■□□□□ 0.15
TRDV1A0A1B0GX56 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRDV1A0A1B0GX56 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRDV1A0A1B0GX56 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRDV1A0A1B0GX56 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRDV1A0A1B0GX56 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRDV1A0A1B0GX56 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.01■□□□□ 0.15
TRDV1A0A1B0GX56 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TRDV1A0A1B0GX56 AC034236.2-201ENST00000606662 1610 ntBASIC16.01■□□□□ 0.15
TRDV1A0A1B0GX56 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRDV1A0A1B0GX56 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRDV1A0A1B0GX56 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TRDV1A0A1B0GX56 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.01■□□□□ 0.15
TRDV1A0A1B0GX56 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRDV1A0A1B0GX56 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TRDV1A0A1B0GX56 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16■□□□□ 0.15
TRDV1A0A1B0GX56 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16■□□□□ 0.15
TRDV1A0A1B0GX56 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRDV1A0A1B0GX56 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
TRDV1A0A1B0GX56 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRDV1A0A1B0GX56 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRDV1A0A1B0GX56 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRDV1A0A1B0GX56 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16■□□□□ 0.15
TRDV1A0A1B0GX56 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRDV1A0A1B0GX56 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRDV1A0A1B0GX56 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16■□□□□ 0.15
TRDV1A0A1B0GX56 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRDV1A0A1B0GX56 AC026185.1-201ENST00000445748 174 ntBASIC16■□□□□ 0.15
TRDV1A0A1B0GX56 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16■□□□□ 0.15
TRDV1A0A1B0GX56 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16■□□□□ 0.15
TRDV1A0A1B0GX56 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16■□□□□ 0.15
TRDV1A0A1B0GX56 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRDV1A0A1B0GX56 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16■□□□□ 0.15
TRDV1A0A1B0GX56 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRDV1A0A1B0GX56 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TRDV1A0A1B0GX56 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRDV1A0A1B0GX56 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TRDV1A0A1B0GX56 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16■□□□□ 0.15
TRDV1A0A1B0GX56 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRDV1A0A1B0GX56 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TRDV1A0A1B0GX56 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRDV1A0A1B0GX56 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRDV1A0A1B0GX56 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRDV1A0A1B0GX56 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16■□□□□ 0.15
TRDV1A0A1B0GX56 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16■□□□□ 0.15
TRDV1A0A1B0GX56 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
TRDV1A0A1B0GX56 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16■□□□□ 0.15
TRDV1A0A1B0GX56 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRDV1A0A1B0GX56 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
TRDV1A0A1B0GX56 AC018695.7-201ENST00000624587 2492 ntBASIC16■□□□□ 0.15
TRDV1A0A1B0GX56 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16■□□□□ 0.15
TRDV1A0A1B0GX56 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.99■□□□□ 0.15
TRDV1A0A1B0GX56 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.99■□□□□ 0.15
TRDV1A0A1B0GX56 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRDV1A0A1B0GX56 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRDV1A0A1B0GX56 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TRDV1A0A1B0GX56 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
TRDV1A0A1B0GX56 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRDV1A0A1B0GX56 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRDV1A0A1B0GX56 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRDV1A0A1B0GX56 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC15.99■□□□□ 0.15
TRDV1A0A1B0GX56 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC15.99■□□□□ 0.15
TRDV1A0A1B0GX56 AC091390.4-202ENST00000476426 537 ntBASIC15.99■□□□□ 0.15
TRDV1A0A1B0GX56 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC15.99■□□□□ 0.15
TRDV1A0A1B0GX56 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms