Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMIM28A0A1B0GU29 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMIM28A0A1B0GU29 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.45■□□□□ 0.7
SMIM28A0A1B0GU29 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.45■□□□□ 0.7
SMIM28A0A1B0GU29 LINC01711-201ENST00000598340 967 ntBASIC19.45■□□□□ 0.7
SMIM28A0A1B0GU29 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.45■□□□□ 0.7
SMIM28A0A1B0GU29 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMIM28A0A1B0GU29 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMIM28A0A1B0GU29 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMIM28A0A1B0GU29 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.45■□□□□ 0.7
SMIM28A0A1B0GU29 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMIM28A0A1B0GU29 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SMIM28A0A1B0GU29 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.45■□□□□ 0.7
SMIM28A0A1B0GU29 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.45■□□□□ 0.7
SMIM28A0A1B0GU29 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.44■□□□□ 0.7
SMIM28A0A1B0GU29 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM28A0A1B0GU29 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
SMIM28A0A1B0GU29 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
SMIM28A0A1B0GU29 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SMIM28A0A1B0GU29 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM28A0A1B0GU29 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM28A0A1B0GU29 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM28A0A1B0GU29 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.44■□□□□ 0.7
SMIM28A0A1B0GU29 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.44■□□□□ 0.7
SMIM28A0A1B0GU29 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM28A0A1B0GU29 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM28A0A1B0GU29 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM28A0A1B0GU29 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.44■□□□□ 0.7
SMIM28A0A1B0GU29 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM28A0A1B0GU29 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
SMIM28A0A1B0GU29 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.44■□□□□ 0.7
SMIM28A0A1B0GU29 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM28A0A1B0GU29 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.44■□□□□ 0.7
SMIM28A0A1B0GU29 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.44■□□□□ 0.7
SMIM28A0A1B0GU29 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.44■□□□□ 0.7
SMIM28A0A1B0GU29 AC112698.1-201ENST00000510299 916 ntBASIC19.44■□□□□ 0.7
SMIM28A0A1B0GU29 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.44■□□□□ 0.7
SMIM28A0A1B0GU29 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.44■□□□□ 0.7
SMIM28A0A1B0GU29 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.44■□□□□ 0.7
SMIM28A0A1B0GU29 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SMIM28A0A1B0GU29 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.44■□□□□ 0.7
SMIM28A0A1B0GU29 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SMIM28A0A1B0GU29 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.44■□□□□ 0.7
SMIM28A0A1B0GU29 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM28A0A1B0GU29 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SMIM28A0A1B0GU29 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.44■□□□□ 0.7
SMIM28A0A1B0GU29 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.44■□□□□ 0.7
SMIM28A0A1B0GU29 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM28A0A1B0GU29 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SMIM28A0A1B0GU29 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMIM28A0A1B0GU29 AC093010.1-201ENST00000473625 1624 ntBASIC19.43■□□□□ 0.7
SMIM28A0A1B0GU29 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.43■□□□□ 0.7
SMIM28A0A1B0GU29 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM28A0A1B0GU29 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.43■□□□□ 0.7
SMIM28A0A1B0GU29 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM28A0A1B0GU29 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM28A0A1B0GU29 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM28A0A1B0GU29 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SMIM28A0A1B0GU29 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM28A0A1B0GU29 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.43■□□□□ 0.7
SMIM28A0A1B0GU29 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM28A0A1B0GU29 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.43■□□□□ 0.7
SMIM28A0A1B0GU29 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM28A0A1B0GU29 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM28A0A1B0GU29 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM28A0A1B0GU29 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM28A0A1B0GU29 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
SMIM28A0A1B0GU29 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.43■□□□□ 0.7
SMIM28A0A1B0GU29 FAAHP1-202ENST00000446499 1238 ntBASIC19.43■□□□□ 0.7
SMIM28A0A1B0GU29 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.43■□□□□ 0.7
SMIM28A0A1B0GU29 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.43■□□□□ 0.7
SMIM28A0A1B0GU29 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.43■□□□□ 0.7
SMIM28A0A1B0GU29 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM28A0A1B0GU29 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM28A0A1B0GU29 AL138831.2-201ENST00000606564 490 ntBASIC19.43■□□□□ 0.7
SMIM28A0A1B0GU29 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM28A0A1B0GU29 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM28A0A1B0GU29 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM28A0A1B0GU29 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM28A0A1B0GU29 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM28A0A1B0GU29 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.43■□□□□ 0.7
SMIM28A0A1B0GU29 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.42■□□□□ 0.7
SMIM28A0A1B0GU29 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.42■□□□□ 0.7
SMIM28A0A1B0GU29 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
SMIM28A0A1B0GU29 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMIM28A0A1B0GU29 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMIM28A0A1B0GU29 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMIM28A0A1B0GU29 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.42■□□□□ 0.7
SMIM28A0A1B0GU29 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.42■□□□□ 0.7
SMIM28A0A1B0GU29 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMIM28A0A1B0GU29 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.42■□□□□ 0.7
SMIM28A0A1B0GU29 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
SMIM28A0A1B0GU29 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.42■□□□□ 0.7
SMIM28A0A1B0GU29 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMIM28A0A1B0GU29 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
SMIM28A0A1B0GU29 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMIM28A0A1B0GU29 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.42■□□□□ 0.7
SMIM28A0A1B0GU29 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.42■□□□□ 0.7
SMIM28A0A1B0GU29 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.42■□□□□ 0.7
SMIM28A0A1B0GU29 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms