Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 BX088651.1-201ENST00000540551 451 ntBASIC17.03■□□□□ 0.32
TRBV5-3A0A0A0MS03 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TRBV5-3A0A0A0MS03 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV5-3A0A0A0MS03 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.03■□□□□ 0.32
TRBV5-3A0A0A0MS03 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.03■□□□□ 0.32
TRBV5-3A0A0A0MS03 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV5-3A0A0A0MS03 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
TRBV5-3A0A0A0MS03 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV5-3A0A0A0MS03 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV5-3A0A0A0MS03 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV5-3A0A0A0MS03 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV5-3A0A0A0MS03 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV5-3A0A0A0MS03 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV5-3A0A0A0MS03 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TRBV5-3A0A0A0MS03 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV5-3A0A0A0MS03 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV5-3A0A0A0MS03 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV5-3A0A0A0MS03 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.03■□□□□ 0.32
TRBV5-3A0A0A0MS03 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV5-3A0A0A0MS03 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV5-3A0A0A0MS03 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV5-3A0A0A0MS03 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV5-3A0A0A0MS03 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV5-3A0A0A0MS03 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.02■□□□□ 0.32
TRBV5-3A0A0A0MS03 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
TRBV5-3A0A0A0MS03 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV5-3A0A0A0MS03 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
TRBV5-3A0A0A0MS03 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.02■□□□□ 0.32
TRBV5-3A0A0A0MS03 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV5-3A0A0A0MS03 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV5-3A0A0A0MS03 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
TRBV5-3A0A0A0MS03 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV5-3A0A0A0MS03 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
TRBV5-3A0A0A0MS03 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV5-3A0A0A0MS03 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TRBV5-3A0A0A0MS03 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV5-3A0A0A0MS03 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.02■□□□□ 0.32
TRBV5-3A0A0A0MS03 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV5-3A0A0A0MS03 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV5-3A0A0A0MS03 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TRBV5-3A0A0A0MS03 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV5-3A0A0A0MS03 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV5-3A0A0A0MS03 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV5-3A0A0A0MS03 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV5-3A0A0A0MS03 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV5-3A0A0A0MS03 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.02■□□□□ 0.32
TRBV5-3A0A0A0MS03 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.02■□□□□ 0.32
TRBV5-3A0A0A0MS03 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.02■□□□□ 0.32
TRBV5-3A0A0A0MS03 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.02■□□□□ 0.32
TRBV5-3A0A0A0MS03 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.02■□□□□ 0.32
TRBV5-3A0A0A0MS03 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV5-3A0A0A0MS03 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TRBV5-3A0A0A0MS03 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRBV5-3A0A0A0MS03 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRBV5-3A0A0A0MS03 LINC00167-201ENST00000530583 1419 ntBASIC17.02■□□□□ 0.31
TRBV5-3A0A0A0MS03 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRBV5-3A0A0A0MS03 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
TRBV5-3A0A0A0MS03 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRBV5-3A0A0A0MS03 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRBV5-3A0A0A0MS03 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV5-3A0A0A0MS03 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.01■□□□□ 0.31
TRBV5-3A0A0A0MS03 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV5-3A0A0A0MS03 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV5-3A0A0A0MS03 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
TRBV5-3A0A0A0MS03 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TRBV5-3A0A0A0MS03 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRBV5-3A0A0A0MS03 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TRBV5-3A0A0A0MS03 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV5-3A0A0A0MS03 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV5-3A0A0A0MS03 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV5-3A0A0A0MS03 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV5-3A0A0A0MS03 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.01■□□□□ 0.31
TRBV5-3A0A0A0MS03 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV5-3A0A0A0MS03 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV5-3A0A0A0MS03 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
TRBV5-3A0A0A0MS03 CCR12P-201ENST00000446203 998 ntBASIC17.01■□□□□ 0.31
TRBV5-3A0A0A0MS03 SEC1P-202ENST00000473944 940 ntBASIC17.01■□□□□ 0.31
TRBV5-3A0A0A0MS03 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
TRBV5-3A0A0A0MS03 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.01■□□□□ 0.31
TRBV5-3A0A0A0MS03 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.01■□□□□ 0.31
TRBV5-3A0A0A0MS03 FITM1-202ENST00000559294 800 ntBASIC17.01■□□□□ 0.31
TRBV5-3A0A0A0MS03 Z99916.2-201ENST00000604037 246 ntBASIC17.01■□□□□ 0.31
TRBV5-3A0A0A0MS03 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.01■□□□□ 0.31
TRBV5-3A0A0A0MS03 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.01■□□□□ 0.31
TRBV5-3A0A0A0MS03 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV5-3A0A0A0MS03 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV5-3A0A0A0MS03 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV5-3A0A0A0MS03 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TRBV5-3A0A0A0MS03 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV5-3A0A0A0MS03 AC012313.1-201ENST00000593393 3059 ntBASIC17.01■□□□□ 0.31
TRBV5-3A0A0A0MS03 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV5-3A0A0A0MS03 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
TRBV5-3A0A0A0MS03 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV5-3A0A0A0MS03 LINC00304-203ENST00000565008 1864 ntBASIC17.01■□□□□ 0.31
TRBV5-3A0A0A0MS03 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.01■□□□□ 0.31
TRBV5-3A0A0A0MS03 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRBV5-3A0A0A0MS03 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TRBV5-3A0A0A0MS03 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV5-3A0A0A0MS03 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV5-3A0A0A0MS03 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms