Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.52■□□□□ 0.23
TRAV27A0A087WT01 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV27A0A087WT01 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
TRAV27A0A087WT01 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV27A0A087WT01 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.52■□□□□ 0.23
TRAV27A0A087WT01 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
TRAV27A0A087WT01 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV27A0A087WT01 KRT8P7-201ENST00000533003 1432 ntBASIC16.52■□□□□ 0.23
TRAV27A0A087WT01 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV27A0A087WT01 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV27A0A087WT01 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
TRAV27A0A087WT01 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV27A0A087WT01 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV27A0A087WT01 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAV27A0A087WT01 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAV27A0A087WT01 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV27A0A087WT01 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV27A0A087WT01 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV27A0A087WT01 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV27A0A087WT01 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV27A0A087WT01 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV27A0A087WT01 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAV27A0A087WT01 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV27A0A087WT01 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV27A0A087WT01 AC007663.1-201ENST00000438948 1240 ntBASIC16.51■□□□□ 0.23
TRAV27A0A087WT01 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.51■□□□□ 0.23
TRAV27A0A087WT01 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.51■□□□□ 0.23
TRAV27A0A087WT01 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.51■□□□□ 0.23
TRAV27A0A087WT01 BX088651.1-201ENST00000540551 451 ntBASIC16.51■□□□□ 0.23
TRAV27A0A087WT01 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV27A0A087WT01 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV27A0A087WT01 AC116562.4-202ENST00000641738 218 ntBASIC16.51■□□□□ 0.23
TRAV27A0A087WT01 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV27A0A087WT01 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV27A0A087WT01 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV27A0A087WT01 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.51■□□□□ 0.23
TRAV27A0A087WT01 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV27A0A087WT01 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
TRAV27A0A087WT01 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV27A0A087WT01 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV27A0A087WT01 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.51■□□□□ 0.23
TRAV27A0A087WT01 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.51■□□□□ 0.23
TRAV27A0A087WT01 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TRAV27A0A087WT01 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAV27A0A087WT01 AC012317.2-201ENST00000623305 2251 ntBASIC16.5■□□□□ 0.23
TRAV27A0A087WT01 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV27A0A087WT01 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV27A0A087WT01 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TRAV27A0A087WT01 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TRAV27A0A087WT01 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
TRAV27A0A087WT01 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV27A0A087WT01 LINC01126-201ENST00000623515 1646 ntBASIC16.5■□□□□ 0.23
TRAV27A0A087WT01 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV27A0A087WT01 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV27A0A087WT01 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.5■□□□□ 0.23
TRAV27A0A087WT01 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.5■□□□□ 0.23
TRAV27A0A087WT01 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV27A0A087WT01 AL355075.4-201ENST00000554988 638 ntBASIC16.5■□□□□ 0.23
TRAV27A0A087WT01 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV27A0A087WT01 C2orf69P3-201ENST00000565542 1120 ntBASIC16.5■□□□□ 0.23
TRAV27A0A087WT01 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
TRAV27A0A087WT01 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
TRAV27A0A087WT01 AC112497.1-201ENST00000624824 639 ntBASIC16.5■□□□□ 0.23
TRAV27A0A087WT01 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV27A0A087WT01 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV27A0A087WT01 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV27A0A087WT01 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV27A0A087WT01 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV27A0A087WT01 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAV27A0A087WT01 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
TRAV27A0A087WT01 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TRAV27A0A087WT01 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAV27A0A087WT01 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV27A0A087WT01 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV27A0A087WT01 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV27A0A087WT01 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV27A0A087WT01 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV27A0A087WT01 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV27A0A087WT01 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV27A0A087WT01 PKD1P1-201ENST00000458669 6805 ntBASIC16.5■□□□□ 0.23
TRAV27A0A087WT01 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV27A0A087WT01 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TRAV27A0A087WT01 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV27A0A087WT01 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV27A0A087WT01 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV27A0A087WT01 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.49■□□□□ 0.23
TRAV27A0A087WT01 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV27A0A087WT01 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV27A0A087WT01 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAV27A0A087WT01 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV27A0A087WT01 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.49■□□□□ 0.23
TRAV27A0A087WT01 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV27A0A087WT01 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.49■□□□□ 0.23
TRAV27A0A087WT01 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.49■□□□□ 0.23
TRAV27A0A087WT01 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV27A0A087WT01 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV27A0A087WT01 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.49■□□□□ 0.23
TRAV27A0A087WT01 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV27A0A087WT01 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV27A0A087WT01 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms