Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.24■□□□□ 0.35
CLCA3PQ9Y6N3 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CLCA3PQ9Y6N3 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.24■□□□□ 0.35
CLCA3PQ9Y6N3 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
CLCA3PQ9Y6N3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCA3PQ9Y6N3 AL163051.1-201ENST00000569214 1512 ntBASIC17.24■□□□□ 0.35
CLCA3PQ9Y6N3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCA3PQ9Y6N3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLCA3PQ9Y6N3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
CLCA3PQ9Y6N3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCA3PQ9Y6N3 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.24■□□□□ 0.35
CLCA3PQ9Y6N3 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCA3PQ9Y6N3 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCA3PQ9Y6N3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLCA3PQ9Y6N3 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CLCA3PQ9Y6N3 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCA3PQ9Y6N3 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLCA3PQ9Y6N3 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
CLCA3PQ9Y6N3 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLCA3PQ9Y6N3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCA3PQ9Y6N3 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CLCA3PQ9Y6N3 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CLCA3PQ9Y6N3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.23■□□□□ 0.35
CLCA3PQ9Y6N3 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCA3PQ9Y6N3 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.23■□□□□ 0.35
CLCA3PQ9Y6N3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCA3PQ9Y6N3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.23■□□□□ 0.35
CLCA3PQ9Y6N3 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCA3PQ9Y6N3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCA3PQ9Y6N3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCA3PQ9Y6N3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.23■□□□□ 0.35
CLCA3PQ9Y6N3 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCA3PQ9Y6N3 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCA3PQ9Y6N3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CLCA3PQ9Y6N3 SPDYE15P-201ENST00000424157 909 ntBASIC17.23■□□□□ 0.35
CLCA3PQ9Y6N3 AC112907.2-201ENST00000448639 330 ntBASIC17.23■□□□□ 0.35
CLCA3PQ9Y6N3 KRT18P35-201ENST00000510488 1269 ntBASIC17.23■□□□□ 0.35
CLCA3PQ9Y6N3 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
CLCA3PQ9Y6N3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.23■□□□□ 0.35
CLCA3PQ9Y6N3 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.23■□□□□ 0.35
CLCA3PQ9Y6N3 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CLCA3PQ9Y6N3 AL445228.2-201ENST00000605589 952 ntBASIC17.23■□□□□ 0.35
CLCA3PQ9Y6N3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.23■□□□□ 0.35
CLCA3PQ9Y6N3 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCA3PQ9Y6N3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCA3PQ9Y6N3 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.23■□□□□ 0.35
CLCA3PQ9Y6N3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCA3PQ9Y6N3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCA3PQ9Y6N3 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCA3PQ9Y6N3 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCA3PQ9Y6N3 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.23■□□□□ 0.35
CLCA3PQ9Y6N3 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.23■□□□□ 0.35
CLCA3PQ9Y6N3 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCA3PQ9Y6N3 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCA3PQ9Y6N3 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCA3PQ9Y6N3 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCA3PQ9Y6N3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CLCA3PQ9Y6N3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.23■□□□□ 0.35
CLCA3PQ9Y6N3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.22■□□□□ 0.35
CLCA3PQ9Y6N3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCA3PQ9Y6N3 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCA3PQ9Y6N3 AL390961.4-201ENST00000623958 2535 ntBASIC17.22■□□□□ 0.35
CLCA3PQ9Y6N3 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCA3PQ9Y6N3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.22■□□□□ 0.35
CLCA3PQ9Y6N3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.22■□□□□ 0.35
CLCA3PQ9Y6N3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCA3PQ9Y6N3 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCA3PQ9Y6N3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCA3PQ9Y6N3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCA3PQ9Y6N3 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.22■□□□□ 0.35
CLCA3PQ9Y6N3 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCA3PQ9Y6N3 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
CLCA3PQ9Y6N3 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCA3PQ9Y6N3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CLCA3PQ9Y6N3 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCA3PQ9Y6N3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.22■□□□□ 0.35
CLCA3PQ9Y6N3 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.22■□□□□ 0.35
CLCA3PQ9Y6N3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.22■□□□□ 0.35
CLCA3PQ9Y6N3 KRT18P38-201ENST00000449496 1282 ntBASIC17.22■□□□□ 0.35
CLCA3PQ9Y6N3 AL671277.2-201ENST00000458060 996 ntBASIC17.22■□□□□ 0.35
CLCA3PQ9Y6N3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCA3PQ9Y6N3 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.22■□□□□ 0.35
CLCA3PQ9Y6N3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.22■□□□□ 0.35
CLCA3PQ9Y6N3 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CLCA3PQ9Y6N3 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CLCA3PQ9Y6N3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCA3PQ9Y6N3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.22■□□□□ 0.35
CLCA3PQ9Y6N3 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCA3PQ9Y6N3 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.22■□□□□ 0.35
CLCA3PQ9Y6N3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.22■□□□□ 0.35
CLCA3PQ9Y6N3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.22■□□□□ 0.35
CLCA3PQ9Y6N3 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
CLCA3PQ9Y6N3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLCA3PQ9Y6N3 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCA3PQ9Y6N3 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.21■□□□□ 0.35
CLCA3PQ9Y6N3 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.21■□□□□ 0.35
CLCA3PQ9Y6N3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CLCA3PQ9Y6N3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCA3PQ9Y6N3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CLCA3PQ9Y6N3 AP000997.3-201ENST00000623333 2250 ntBASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms