Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.27■□□□□ 0.36
GPC6Q9Y625 SLC25A1P4-201ENST00000567977 778 ntBASIC17.27■□□□□ 0.36
GPC6Q9Y625 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
GPC6Q9Y625 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GPC6Q9Y625 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
GPC6Q9Y625 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.27■□□□□ 0.35
GPC6Q9Y625 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.27■□□□□ 0.35
GPC6Q9Y625 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.27■□□□□ 0.35
GPC6Q9Y625 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.27■□□□□ 0.35
GPC6Q9Y625 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.27■□□□□ 0.35
GPC6Q9Y625 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GPC6Q9Y625 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
GPC6Q9Y625 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
GPC6Q9Y625 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GPC6Q9Y625 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GPC6Q9Y625 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GPC6Q9Y625 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.26■□□□□ 0.35
GPC6Q9Y625 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
GPC6Q9Y625 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
GPC6Q9Y625 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
GPC6Q9Y625 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GPC6Q9Y625 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
GPC6Q9Y625 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
GPC6Q9Y625 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
GPC6Q9Y625 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
GPC6Q9Y625 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GPC6Q9Y625 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
GPC6Q9Y625 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GPC6Q9Y625 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.26■□□□□ 0.35
GPC6Q9Y625 AL596275.1-201ENST00000423464 877 ntBASIC17.26■□□□□ 0.35
GPC6Q9Y625 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GPC6Q9Y625 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.26■□□□□ 0.35
GPC6Q9Y625 RBM17P1-201ENST00000453646 1190 ntBASIC17.26■□□□□ 0.35
GPC6Q9Y625 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GPC6Q9Y625 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.26■□□□□ 0.35
GPC6Q9Y625 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.26■□□□□ 0.35
GPC6Q9Y625 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.26■□□□□ 0.35
GPC6Q9Y625 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GPC6Q9Y625 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
GPC6Q9Y625 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.26■□□□□ 0.35
GPC6Q9Y625 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.26■□□□□ 0.35
GPC6Q9Y625 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GPC6Q9Y625 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.26■□□□□ 0.35
GPC6Q9Y625 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GPC6Q9Y625 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GPC6Q9Y625 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
GPC6Q9Y625 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
GPC6Q9Y625 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GPC6Q9Y625 AC067852.2-201ENST00000590513 2313 ntBASIC17.26■□□□□ 0.35
GPC6Q9Y625 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GPC6Q9Y625 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.26■□□□□ 0.35
GPC6Q9Y625 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GPC6Q9Y625 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GPC6Q9Y625 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.25■□□□□ 0.35
GPC6Q9Y625 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GPC6Q9Y625 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
GPC6Q9Y625 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GPC6Q9Y625 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GPC6Q9Y625 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GPC6Q9Y625 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GPC6Q9Y625 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GPC6Q9Y625 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GPC6Q9Y625 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
GPC6Q9Y625 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GPC6Q9Y625 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
GPC6Q9Y625 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GPC6Q9Y625 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GPC6Q9Y625 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GPC6Q9Y625 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GPC6Q9Y625 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
GPC6Q9Y625 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GPC6Q9Y625 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GPC6Q9Y625 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
GPC6Q9Y625 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GPC6Q9Y625 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GPC6Q9Y625 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.25■□□□□ 0.35
GPC6Q9Y625 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.25■□□□□ 0.35
GPC6Q9Y625 AP005242.2-201ENST00000580065 1175 ntBASIC17.25■□□□□ 0.35
GPC6Q9Y625 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.25■□□□□ 0.35
GPC6Q9Y625 AC008622.2-201ENST00000617006 1229 ntBASIC17.25■□□□□ 0.35
GPC6Q9Y625 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.25■□□□□ 0.35
GPC6Q9Y625 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
GPC6Q9Y625 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.25■□□□□ 0.35
GPC6Q9Y625 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
GPC6Q9Y625 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
GPC6Q9Y625 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GPC6Q9Y625 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.25■□□□□ 0.35
GPC6Q9Y625 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.25■□□□□ 0.35
GPC6Q9Y625 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.25■□□□□ 0.35
GPC6Q9Y625 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GPC6Q9Y625 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GPC6Q9Y625 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
GPC6Q9Y625 AC008556.1-201ENST00000610908 2040 ntBASIC17.25■□□□□ 0.35
GPC6Q9Y625 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.25■□□□□ 0.35
GPC6Q9Y625 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
GPC6Q9Y625 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GPC6Q9Y625 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GPC6Q9Y625 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.24■□□□□ 0.35
GPC6Q9Y625 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GPC6Q9Y625 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms