Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB1Q9Y5F3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB1Q9Y5F3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB1Q9Y5F3 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB1Q9Y5F3 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHB1Q9Y5F3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB1Q9Y5F3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB1Q9Y5F3 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB1Q9Y5F3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB1Q9Y5F3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDHB1Q9Y5F3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB1Q9Y5F3 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB1Q9Y5F3 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB1Q9Y5F3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
PCDHB1Q9Y5F3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHB1Q9Y5F3 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PCDHB1Q9Y5F3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB1Q9Y5F3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHB1Q9Y5F3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB1Q9Y5F3 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.21■□□□□ 0.51
PCDHB1Q9Y5F3 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.21■□□□□ 0.51
PCDHB1Q9Y5F3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
PCDHB1Q9Y5F3 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHB1Q9Y5F3 RN7SL510P-201ENST00000581311 263 ntBASIC18.21■□□□□ 0.51
PCDHB1Q9Y5F3 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PCDHB1Q9Y5F3 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB1Q9Y5F3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
PCDHB1Q9Y5F3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB1Q9Y5F3 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDHB1Q9Y5F3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHB1Q9Y5F3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB1Q9Y5F3 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB1Q9Y5F3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.21■□□□□ 0.51
PCDHB1Q9Y5F3 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB1Q9Y5F3 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB1Q9Y5F3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB1Q9Y5F3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
PCDHB1Q9Y5F3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHB1Q9Y5F3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB1Q9Y5F3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB1Q9Y5F3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHB1Q9Y5F3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHB1Q9Y5F3 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PCDHB1Q9Y5F3 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB1Q9Y5F3 SDHAP2-201ENST00000455183 2001 ntBASIC18.2■□□□□ 0.5
PCDHB1Q9Y5F3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHB1Q9Y5F3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB1Q9Y5F3 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
PCDHB1Q9Y5F3 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB1Q9Y5F3 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB1Q9Y5F3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PCDHB1Q9Y5F3 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHB1Q9Y5F3 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB1Q9Y5F3 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PCDHB1Q9Y5F3 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB1Q9Y5F3 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB1Q9Y5F3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHB1Q9Y5F3 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHB1Q9Y5F3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PCDHB1Q9Y5F3 AC092329.2-201ENST00000598402 547 ntBASIC18.2■□□□□ 0.5
PCDHB1Q9Y5F3 AC010240.3-201ENST00000607688 395 ntBASIC18.2■□□□□ 0.5
PCDHB1Q9Y5F3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB1Q9Y5F3 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHB1Q9Y5F3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB1Q9Y5F3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB1Q9Y5F3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB1Q9Y5F3 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB1Q9Y5F3 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PCDHB1Q9Y5F3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB1Q9Y5F3 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHB1Q9Y5F3 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB1Q9Y5F3 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB1Q9Y5F3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
PCDHB1Q9Y5F3 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHB1Q9Y5F3 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB1Q9Y5F3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHB1Q9Y5F3 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB1Q9Y5F3 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PCDHB1Q9Y5F3 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHB1Q9Y5F3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB1Q9Y5F3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB1Q9Y5F3 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB1Q9Y5F3 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHB1Q9Y5F3 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB1Q9Y5F3 RASA4DP-201ENST00000460726 1199 ntBASIC18.19■□□□□ 0.5
PCDHB1Q9Y5F3 SEC1P-202ENST00000473944 940 ntBASIC18.19■□□□□ 0.5
PCDHB1Q9Y5F3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHB1Q9Y5F3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB1Q9Y5F3 AC093677.2-201ENST00000600169 1863 ntBASIC18.19■□□□□ 0.5
PCDHB1Q9Y5F3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PCDHB1Q9Y5F3 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB1Q9Y5F3 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB1Q9Y5F3 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.19■□□□□ 0.5
PCDHB1Q9Y5F3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHB1Q9Y5F3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHB1Q9Y5F3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHB1Q9Y5F3 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB1Q9Y5F3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PCDHB1Q9Y5F3 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
PCDHB1Q9Y5F3 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms