Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB11Q9Y5F2 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHB11Q9Y5F2 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB11Q9Y5F2 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PCDHB11Q9Y5F2 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PCDHB11Q9Y5F2 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB11Q9Y5F2 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHB11Q9Y5F2 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB11Q9Y5F2 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB11Q9Y5F2 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB11Q9Y5F2 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHB11Q9Y5F2 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB11Q9Y5F2 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHB11Q9Y5F2 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB11Q9Y5F2 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB11Q9Y5F2 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDHB11Q9Y5F2 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB11Q9Y5F2 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB11Q9Y5F2 AC004870.1-201ENST00000315132 882 ntBASIC17.85■□□□□ 0.45
PCDHB11Q9Y5F2 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB11Q9Y5F2 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHB11Q9Y5F2 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB11Q9Y5F2 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB11Q9Y5F2 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB11Q9Y5F2 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB11Q9Y5F2 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB11Q9Y5F2 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PCDHB11Q9Y5F2 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHB11Q9Y5F2 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.85■□□□□ 0.45
PCDHB11Q9Y5F2 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
PCDHB11Q9Y5F2 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.85■□□□□ 0.45
PCDHB11Q9Y5F2 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHB11Q9Y5F2 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB11Q9Y5F2 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.85■□□□□ 0.45
PCDHB11Q9Y5F2 AC010240.3-201ENST00000607688 395 ntBASIC17.85■□□□□ 0.45
PCDHB11Q9Y5F2 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB11Q9Y5F2 NPAP1P7-201ENST00000613027 823 ntBASIC17.85■□□□□ 0.45
PCDHB11Q9Y5F2 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB11Q9Y5F2 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB11Q9Y5F2 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB11Q9Y5F2 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB11Q9Y5F2 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB11Q9Y5F2 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB11Q9Y5F2 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB11Q9Y5F2 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PCDHB11Q9Y5F2 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHB11Q9Y5F2 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB11Q9Y5F2 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PCDHB11Q9Y5F2 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB11Q9Y5F2 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHB11Q9Y5F2 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB11Q9Y5F2 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB11Q9Y5F2 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDHB11Q9Y5F2 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB11Q9Y5F2 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHB11Q9Y5F2 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDHB11Q9Y5F2 AL163051.1-201ENST00000569214 1512 ntBASIC17.84■□□□□ 0.45
PCDHB11Q9Y5F2 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB11Q9Y5F2 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB11Q9Y5F2 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB11Q9Y5F2 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDHB11Q9Y5F2 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB11Q9Y5F2 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.84■□□□□ 0.45
PCDHB11Q9Y5F2 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB11Q9Y5F2 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB11Q9Y5F2 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB11Q9Y5F2 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHB11Q9Y5F2 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB11Q9Y5F2 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB11Q9Y5F2 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB11Q9Y5F2 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PCDHB11Q9Y5F2 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB11Q9Y5F2 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
PCDHB11Q9Y5F2 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB11Q9Y5F2 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB11Q9Y5F2 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.83■□□□□ 0.45
PCDHB11Q9Y5F2 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHB11Q9Y5F2 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHB11Q9Y5F2 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.45
PCDHB11Q9Y5F2 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
PCDHB11Q9Y5F2 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB11Q9Y5F2 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.83■□□□□ 0.44
PCDHB11Q9Y5F2 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB11Q9Y5F2 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.83■□□□□ 0.44
PCDHB11Q9Y5F2 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB11Q9Y5F2 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.83■□□□□ 0.44
PCDHB11Q9Y5F2 MIR3917-201ENST00000580971 93 ntBASIC17.83■□□□□ 0.44
PCDHB11Q9Y5F2 RN7SL510P-201ENST00000581311 263 ntBASIC17.83■□□□□ 0.44
PCDHB11Q9Y5F2 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB11Q9Y5F2 AL354751.1-201ENST00000412768 1863 ntBASIC17.83■□□□□ 0.44
PCDHB11Q9Y5F2 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB11Q9Y5F2 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB11Q9Y5F2 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
PCDHB11Q9Y5F2 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDHB11Q9Y5F2 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB11Q9Y5F2 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB11Q9Y5F2 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB11Q9Y5F2 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB11Q9Y5F2 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDHB11Q9Y5F2 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms