Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
RNF11Q9Y3C5 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF11Q9Y3C5 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF11Q9Y3C5 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.77■□□□□ 0.44
RNF11Q9Y3C5 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
RNF11Q9Y3C5 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF11Q9Y3C5 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF11Q9Y3C5 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.77■□□□□ 0.44
RNF11Q9Y3C5 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.77■□□□□ 0.44
RNF11Q9Y3C5 EGLN1P1-201ENST00000531623 762 ntBASIC17.77■□□□□ 0.44
RNF11Q9Y3C5 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.77■□□□□ 0.44
RNF11Q9Y3C5 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF11Q9Y3C5 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.77■□□□□ 0.44
RNF11Q9Y3C5 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF11Q9Y3C5 AC010947.1-201ENST00000623454 693 ntBASIC17.77■□□□□ 0.44
RNF11Q9Y3C5 AC010653.2-201ENST00000623505 997 ntBASIC17.77■□□□□ 0.44
RNF11Q9Y3C5 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF11Q9Y3C5 AC124067.4-201ENST00000519691 2379 ntBASIC17.77■□□□□ 0.44
RNF11Q9Y3C5 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF11Q9Y3C5 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.77■□□□□ 0.43
RNF11Q9Y3C5 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.77■□□□□ 0.43
RNF11Q9Y3C5 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RNF11Q9Y3C5 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
RNF11Q9Y3C5 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
RNF11Q9Y3C5 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.77■□□□□ 0.43
RNF11Q9Y3C5 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.77■□□□□ 0.43
RNF11Q9Y3C5 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RNF11Q9Y3C5 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF11Q9Y3C5 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF11Q9Y3C5 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF11Q9Y3C5 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF11Q9Y3C5 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF11Q9Y3C5 AC009102.3-201ENST00000623118 1491 ntBASIC17.76■□□□□ 0.43
RNF11Q9Y3C5 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
RNF11Q9Y3C5 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF11Q9Y3C5 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF11Q9Y3C5 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF11Q9Y3C5 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF11Q9Y3C5 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RNF11Q9Y3C5 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF11Q9Y3C5 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF11Q9Y3C5 KRT8P7-201ENST00000533003 1432 ntBASIC17.76■□□□□ 0.43
RNF11Q9Y3C5 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF11Q9Y3C5 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RNF11Q9Y3C5 MIR149-201ENST00000384879 89 ntBASIC17.76■□□□□ 0.43
RNF11Q9Y3C5 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.76■□□□□ 0.43
RNF11Q9Y3C5 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.76■□□□□ 0.43
RNF11Q9Y3C5 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.76■□□□□ 0.43
RNF11Q9Y3C5 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF11Q9Y3C5 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF11Q9Y3C5 AL096828.2-201ENST00000567259 1965 ntBASIC17.76■□□□□ 0.43
RNF11Q9Y3C5 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF11Q9Y3C5 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF11Q9Y3C5 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF11Q9Y3C5 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF11Q9Y3C5 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF11Q9Y3C5 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.76■□□□□ 0.43
RNF11Q9Y3C5 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF11Q9Y3C5 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF11Q9Y3C5 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RNF11Q9Y3C5 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF11Q9Y3C5 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF11Q9Y3C5 PHGDH-209ENST00000641074 1780 ntBASIC17.76■□□□□ 0.43
RNF11Q9Y3C5 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF11Q9Y3C5 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF11Q9Y3C5 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF11Q9Y3C5 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF11Q9Y3C5 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RNF11Q9Y3C5 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF11Q9Y3C5 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF11Q9Y3C5 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF11Q9Y3C5 AC138028.4-201ENST00000564984 1845 ntBASIC17.75■□□□□ 0.43
RNF11Q9Y3C5 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF11Q9Y3C5 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF11Q9Y3C5 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF11Q9Y3C5 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF11Q9Y3C5 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF11Q9Y3C5 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF11Q9Y3C5 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF11Q9Y3C5 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF11Q9Y3C5 MMP23A-201ENST00000234610 1017 ntBASIC17.75■□□□□ 0.43
RNF11Q9Y3C5 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RNF11Q9Y3C5 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF11Q9Y3C5 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF11Q9Y3C5 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.75■□□□□ 0.43
RNF11Q9Y3C5 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF11Q9Y3C5 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF11Q9Y3C5 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF11Q9Y3C5 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF11Q9Y3C5 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF11Q9Y3C5 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF11Q9Y3C5 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF11Q9Y3C5 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF11Q9Y3C5 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF11Q9Y3C5 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF11Q9Y3C5 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF11Q9Y3C5 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF11Q9Y3C5 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF11Q9Y3C5 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF11Q9Y3C5 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms