Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC12.71□□□□□ -0.37
UBE2D4Q9Y2X8 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2D4Q9Y2X8 PCDHA12-202ENST00000613593 2588 ntBASIC12.71□□□□□ -0.37
UBE2D4Q9Y2X8 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2D4Q9Y2X8 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2D4Q9Y2X8 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
UBE2D4Q9Y2X8 MCCD1P1-208ENST00000445732 328 ntBASIC12.71□□□□□ -0.37
UBE2D4Q9Y2X8 FAM207BP-201ENST00000447172 505 ntBASIC12.71□□□□□ -0.37
UBE2D4Q9Y2X8 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC12.71□□□□□ -0.37
UBE2D4Q9Y2X8 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2D4Q9Y2X8 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2D4Q9Y2X8 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC12.71□□□□□ -0.37
UBE2D4Q9Y2X8 AC124016.1-201ENST00000609552 612 ntBASIC12.71□□□□□ -0.37
UBE2D4Q9Y2X8 AC110285.5-201ENST00000611501 352 ntBASIC12.71□□□□□ -0.37
UBE2D4Q9Y2X8 PP12613-201ENST00000424958 2230 ntBASIC12.71□□□□□ -0.37
UBE2D4Q9Y2X8 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2D4Q9Y2X8 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
UBE2D4Q9Y2X8 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2D4Q9Y2X8 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBE2D4Q9Y2X8 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
UBE2D4Q9Y2X8 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
UBE2D4Q9Y2X8 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
UBE2D4Q9Y2X8 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
UBE2D4Q9Y2X8 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
UBE2D4Q9Y2X8 AC141586.5-201ENST00000624546 2050 ntBASIC12.71□□□□□ -0.38
UBE2D4Q9Y2X8 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
UBE2D4Q9Y2X8 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
UBE2D4Q9Y2X8 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC12.71□□□□□ -0.38
UBE2D4Q9Y2X8 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
UBE2D4Q9Y2X8 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
UBE2D4Q9Y2X8 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
UBE2D4Q9Y2X8 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D4Q9Y2X8 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D4Q9Y2X8 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D4Q9Y2X8 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC12.7□□□□□ -0.38
UBE2D4Q9Y2X8 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
UBE2D4Q9Y2X8 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
UBE2D4Q9Y2X8 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D4Q9Y2X8 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
UBE2D4Q9Y2X8 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC12.7□□□□□ -0.38
UBE2D4Q9Y2X8 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC12.7□□□□□ -0.38
UBE2D4Q9Y2X8 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC12.7□□□□□ -0.38
UBE2D4Q9Y2X8 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D4Q9Y2X8 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D4Q9Y2X8 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D4Q9Y2X8 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
UBE2D4Q9Y2X8 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
UBE2D4Q9Y2X8 ELP6-205ENST00000439305 880 ntTSL 2 BASIC12.7□□□□□ -0.38
UBE2D4Q9Y2X8 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC12.7□□□□□ -0.38
UBE2D4Q9Y2X8 AC133681.1-201ENST00000465482 601 ntBASIC12.7□□□□□ -0.38
UBE2D4Q9Y2X8 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
UBE2D4Q9Y2X8 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC12.7□□□□□ -0.38
UBE2D4Q9Y2X8 AC104771.1-201ENST00000603335 964 ntBASIC12.7□□□□□ -0.38
UBE2D4Q9Y2X8 AC008622.2-201ENST00000617006 1229 ntBASIC12.7□□□□□ -0.38
UBE2D4Q9Y2X8 AL031985.4-201ENST00000642138 673 ntBASIC12.7□□□□□ -0.38
UBE2D4Q9Y2X8 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
UBE2D4Q9Y2X8 KRT18P55-202ENST00000578578 1546 ntBASIC12.7□□□□□ -0.38
UBE2D4Q9Y2X8 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D4Q9Y2X8 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D4Q9Y2X8 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC12.7□□□□□ -0.38
UBE2D4Q9Y2X8 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
UBE2D4Q9Y2X8 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
UBE2D4Q9Y2X8 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D4Q9Y2X8 AC080080.1-201ENST00000625121 2420 ntBASIC12.7□□□□□ -0.38
UBE2D4Q9Y2X8 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D4Q9Y2X8 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D4Q9Y2X8 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC12.7□□□□□ -0.38
UBE2D4Q9Y2X8 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D4Q9Y2X8 KRT16P1-201ENST00000399124 1418 ntBASIC12.7□□□□□ -0.38
UBE2D4Q9Y2X8 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC12.7□□□□□ -0.38
UBE2D4Q9Y2X8 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
UBE2D4Q9Y2X8 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UBE2D4Q9Y2X8 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC12.7□□□□□ -0.38
UBE2D4Q9Y2X8 AC099398.1-201ENST00000567919 2776 ntBASIC12.69□□□□□ -0.38
UBE2D4Q9Y2X8 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2D4Q9Y2X8 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2D4Q9Y2X8 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2D4Q9Y2X8 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2D4Q9Y2X8 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC12.69□□□□□ -0.38
UBE2D4Q9Y2X8 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
UBE2D4Q9Y2X8 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2D4Q9Y2X8 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2D4Q9Y2X8 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2D4Q9Y2X8 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC12.69□□□□□ -0.38
UBE2D4Q9Y2X8 HARS-201ENST00000307633 1780 ntTSL 2 BASIC12.69□□□□□ -0.38
UBE2D4Q9Y2X8 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2D4Q9Y2X8 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC12.69□□□□□ -0.38
UBE2D4Q9Y2X8 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2D4Q9Y2X8 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2D4Q9Y2X8 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC12.69□□□□□ -0.38
UBE2D4Q9Y2X8 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2D4Q9Y2X8 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2D4Q9Y2X8 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2D4Q9Y2X8 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2D4Q9Y2X8 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2D4Q9Y2X8 AL023284.2-201ENST00000405850 579 ntBASIC12.69□□□□□ -0.38
UBE2D4Q9Y2X8 AC008040.2-201ENST00000461049 708 ntBASIC12.69□□□□□ -0.38
UBE2D4Q9Y2X8 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2D4Q9Y2X8 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
UBE2D4Q9Y2X8 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms