Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA1Q9UND3 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA1Q9UND3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.81■□□□□ 0.28
NPIPA1Q9UND3 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA1Q9UND3 MIR662-201ENST00000384847 95 ntBASIC16.81■□□□□ 0.28
NPIPA1Q9UND3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA1Q9UND3 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA1Q9UND3 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.81■□□□□ 0.28
NPIPA1Q9UND3 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
NPIPA1Q9UND3 MIR3180-1-201ENST00000580374 94 ntBASIC16.81■□□□□ 0.28
NPIPA1Q9UND3 MIR3180-3-201ENST00000584616 94 ntBASIC16.81■□□□□ 0.28
NPIPA1Q9UND3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.81■□□□□ 0.28
NPIPA1Q9UND3 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
NPIPA1Q9UND3 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
NPIPA1Q9UND3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA1Q9UND3 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA1Q9UND3 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.81■□□□□ 0.28
NPIPA1Q9UND3 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA1Q9UND3 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.81■□□□□ 0.28
NPIPA1Q9UND3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.81■□□□□ 0.28
NPIPA1Q9UND3 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
NPIPA1Q9UND3 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
NPIPA1Q9UND3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA1Q9UND3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPA1Q9UND3 KRT8P32-201ENST00000512863 1461 ntBASIC16.8■□□□□ 0.28
NPIPA1Q9UND3 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPA1Q9UND3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.8■□□□□ 0.28
NPIPA1Q9UND3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPA1Q9UND3 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPA1Q9UND3 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.8■□□□□ 0.28
NPIPA1Q9UND3 HOXB1-202ENST00000577092 1414 ntBASIC16.8■□□□□ 0.28
NPIPA1Q9UND3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPA1Q9UND3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.8■□□□□ 0.28
NPIPA1Q9UND3 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.8■□□□□ 0.28
NPIPA1Q9UND3 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
NPIPA1Q9UND3 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.8■□□□□ 0.28
NPIPA1Q9UND3 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPA1Q9UND3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.8■□□□□ 0.28
NPIPA1Q9UND3 KRT18P1-202ENST00000452408 1331 ntBASIC16.8■□□□□ 0.28
NPIPA1Q9UND3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
NPIPA1Q9UND3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPA1Q9UND3 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPA1Q9UND3 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
NPIPA1Q9UND3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.8■□□□□ 0.28
NPIPA1Q9UND3 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPA1Q9UND3 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPA1Q9UND3 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPA1Q9UND3 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPA1Q9UND3 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
NPIPA1Q9UND3 CHCHD2P8-201ENST00000429873 447 ntBASIC16.8■□□□□ 0.28
NPIPA1Q9UND3 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
NPIPA1Q9UND3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.8■□□□□ 0.28
NPIPA1Q9UND3 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.8■□□□□ 0.28
NPIPA1Q9UND3 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.8■□□□□ 0.28
NPIPA1Q9UND3 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.8■□□□□ 0.28
NPIPA1Q9UND3 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.8■□□□□ 0.28
NPIPA1Q9UND3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPA1Q9UND3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPA1Q9UND3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
NPIPA1Q9UND3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPA1Q9UND3 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPA1Q9UND3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.8■□□□□ 0.28
NPIPA1Q9UND3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.8■□□□□ 0.28
NPIPA1Q9UND3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
NPIPA1Q9UND3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.79■□□□□ 0.28
NPIPA1Q9UND3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA1Q9UND3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.79■□□□□ 0.28
NPIPA1Q9UND3 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
NPIPA1Q9UND3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA1Q9UND3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.79■□□□□ 0.28
NPIPA1Q9UND3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.79■□□□□ 0.28
NPIPA1Q9UND3 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.79■□□□□ 0.28
NPIPA1Q9UND3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA1Q9UND3 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA1Q9UND3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA1Q9UND3 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA1Q9UND3 AC034236.2-201ENST00000606662 1610 ntBASIC16.79■□□□□ 0.28
NPIPA1Q9UND3 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.79■□□□□ 0.28
NPIPA1Q9UND3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA1Q9UND3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
NPIPA1Q9UND3 RNF126P1-202ENST00000569893 925 ntBASIC16.79■□□□□ 0.28
NPIPA1Q9UND3 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.79■□□□□ 0.28
NPIPA1Q9UND3 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.79■□□□□ 0.28
NPIPA1Q9UND3 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
NPIPA1Q9UND3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.79■□□□□ 0.28
NPIPA1Q9UND3 AC068587.9-201ENST00000641814 219 ntBASIC16.79■□□□□ 0.28
NPIPA1Q9UND3 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.79■□□□□ 0.28
NPIPA1Q9UND3 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
NPIPA1Q9UND3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.79■□□□□ 0.28
NPIPA1Q9UND3 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA1Q9UND3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA1Q9UND3 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.79■□□□□ 0.28
NPIPA1Q9UND3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA1Q9UND3 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.79■□□□□ 0.28
NPIPA1Q9UND3 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA1Q9UND3 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA1Q9UND3 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
NPIPA1Q9UND3 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA1Q9UND3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.79■□□□□ 0.28
NPIPA1Q9UND3 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms